RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 XRCC6P12956 609 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 IL1R1P14778 569 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZKSCAN1P17029 563 aaPredicted RBP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 GPD1P21695 349 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 FBLP22087 321 aaKnown RBP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 CYP2C18P33260 490 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 PDE6CP51160 858 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 NEK3P51956 506 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 NHLH1Q02575 133 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 HSP90AB4PQ58FF6 505 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 PLAC9Q5JTB6 97 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 TEDDM1Q5T9Z0 273 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 IL31Q6EBC2 164 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 ABRAQ8N0Z2 381 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 STK31Q9BXU1 1019 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 LRRC27Q9C0I9 530 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 GLOD4Q9HC38 313 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 GBA2Q9HCG7 927 aaPredicted RBP4□□□□□ -1.77
HMGB1P6-201ENST00000569046 XPNPEP3Q9NQH7 507 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 DUSP22Q9NRW4 184 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 SERGEFQ9UGK8 458 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 TNS2Q63HR2 1409 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 MON2Q7Z3U7 1717 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 KIAA1551Q9HCM1 1747 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 UBR3Q6ZT12 1888 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 MAP3K5Q99683 1374 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 ABCC6O95255 1503 aa4□□□□□ -1.77
HMGB1P6-201ENST00000569046 TTC21BQ7Z4L5 1316 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 IGSF1Q8N6C5 1336 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SBF1O95248 1867 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 PKD1L3Q7Z443 1732 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 MBD3L4A6NDZ8 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 MBD3L3A6NE82 208 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 H7C4K7 107 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 GCOM1H8Y6P7 765 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 MASP2O00187 686 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 PROP1O75360 226 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 HNRNPCP07910 306 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 FAM163BP0C2L3 166 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF37AP17032 561 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 NDUFB7P17568 137 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 ENGP17813 658 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 ALDH9A1P49189 494 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 COLEC12Q5KU26 742 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SLC9A4Q6AI14 798 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF788Q6ZQV5 615 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SPICE1Q8N0Z3 855 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 NME8Q8N427 588 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 PNISRQ8TF01 805 aaKnown RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 OSCP1Q8WVF1 389 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 XAGE5Q8WWM1 108 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SOCS4Q8WXH5 440 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SPSB4Q96A44 273 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 REPS1Q96D71 796 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 AS3MTQ9HBK9 375 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZNF287Q9HBT7 754 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 PTPRHQ9HD43 1115 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 DDX21Q9NR30 783 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 BCCIPQ9P287 314 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 DNMT3BQ9UBC3 853 aaKnown RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 CCNL1Q9UK58 526 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 OGDHLQ9ULD0 1010 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 SH2B3Q9UQQ2 575 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 CDY1Q9Y6F8 540 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 NFAT5O94916 1531 aa3.99□□□□□ -1.77
HMGB1P6-201ENST00000569046 C4BP0C0L5 1744 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 BCL9O00512 1426 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 FAM208AQ9UK61 1670 aaKnown RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 A0A0G2JLW4 131 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 MGEA5O60502 916 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 RASSF9O75901 435 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 ONECUT2O95948 504 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 FGAP02671 866 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 NHLRC4P0CG21 123 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 TRIM27P14373 513 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 KLRC1P26715 233 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CTGFP29279 349 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 PRKAG1P54619 331 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 PDE1AP54750 535 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 SOX10P56693 466 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 EEFSECP57772 596 aaKnown RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 C21orf58P58505 322 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 SATB1Q01826 763 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 TFF2Q03403 129 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 ZRSR2Q15696 482 aaKnown RBP3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 NPY5RQ15761 445 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 CYP1B1Q16678 543 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 FAM153CQ494X1 144 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 SLC44A4Q53GD3 710 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 FCRL6Q6DN72 434 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 ANKRD16Q6P6B7 361 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 SYCE2Q6PIF2 218 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 DPY19L3Q6ZPD9 716 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 IZUMO1Q8IYV9 350 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 LRRC71Q8N4P6 559 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 DNAJB14Q8TBM8 379 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 DPF1Q92782 380 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 NELL1Q92832 810 aa3.98□□□□□ -1.77
HMGB1P6-201ENST00000569046 LENG8Q96PV6 779 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms