RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 FANCLQ9NW38 375 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 MARCH2Q9P0N8 246 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 WDR35Q9P2L0 1181 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 EBF1Q9UH73 591 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 DNAJC12Q9UKB3 198 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 NUDT5Q9UKK9 219 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 SIK3Q9Y2K2 1263 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC27A6Q9Y2P4 619 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 ZNF292O60281 2723 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 SDK1Q7Z5N4 2213 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CHD5Q8TDI0 1954 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 CFAP54Q96N23 3096 aa8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 TNRC6BQ9UPQ9 1833 aaKnown RBP8.57□□□□□ -1.04
HDGFL3-205ENST00000568129 FRYLO94915 3013 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 M0QYV0 167 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 PAPSS1O43252 624 aaPredicted RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 RNF40O75150 1001 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 TULP3O75386 442 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 LETM1O95202 739 aaPredicted RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 IGLV3-25P01717 112 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 LMNAP02545 664 aaKnown RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 LTFP02788 710 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 GLI1P08151 1106 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 KRT5P13647 590 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 UCHL3P15374 230 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 BPIFB4P59827 614 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 PTK2Q05397 1052 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 TYRO3Q06418 890 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 FYB2Q5VWT5 728 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 BTBD8Q5XKL5 378 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 DENND1BQ6P3S1 775 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 TSSK4Q6SA08 328 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 KIAA0907Q7Z7F0 614 aaPredicted RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 WDR5BQ86VZ2 330 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 LONP2Q86WA8 852 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 CREBRFQ8IUR6 639 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 SIX6OS1Q8N1H7 587 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 DDX1Q92499 740 aaKnown RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC39A13Q96H72 371 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 NACA2Q9H009 215 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 GANQ9H2C0 597 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 LSM7Q9UK45 103 aaKnown RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 AGO1Q9UL18 857 aaKnown RBP8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 R4GN57 208 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 GPR179Q6PRD1 2367 aa8.56□□□□□ -1.04
HDGFL3-205ENST00000568129 GVINP1Q7Z2Y8 2422 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC12A8A0AV02 714 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 THAP12O43422 761 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 HRO43593 1189 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 GFRA3O60609 400 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 KAT7O95251 611 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 APODP05090 189 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 LCP1P13796 627 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 TYRP14679 529 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 HNRNPLP14866 589 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 CORO1AP31146 461 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 GABRB2P47870 512 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 RGS7P49802 495 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 JAM2P57087 298 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ZNF445P59923 1031 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 MYL5Q02045 173 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 DMWDQ09019 674 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 EFEMP1Q12805 493 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 PDCLQ13371 301 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ENPP2Q13822 863 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 DRAP1Q14919 205 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ARHGAP44Q17R89 818 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 HSP90AA4PQ58FG1 418 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 MPP7Q5T2T1 576 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ADGRF1Q5T601 910 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC47A2Q86VL8 602 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 RASSF3Q86WH2 238 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 FMNL3Q8IVF7 1028 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SFTPA1Q8IWL2 248 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SCUBE3Q8IX30 993 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ZNF397Q8NF99 534 aaPredicted RBP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 RPLP0P6Q8NHW5 317 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 CLEC4CQ8WTT0 213 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ATRIPQ8WXE1 791 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ACDQ96AP0 544 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 PIWIL1Q96J94 861 aaKnown RBP8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 ERGIC2Q96RQ1 377 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SLC2A11Q9BYW1 496 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 CD248Q9HCU0 757 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 DEC1Q9P2X7 70 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 SFMBT1Q9UHJ3 866 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 STRIP2Q9ULQ0 834 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 MMP17Q9ULZ9 603 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
HDGFL3-205ENST00000568129 WDR87Q6ZQQ6 2873 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 MUC22E2RYF6 1773 aaPredicted RBP8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 ANTXRLA6NF34 631 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 LGALS16A8MUM7 142 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 E5RJQ4 531 aa8.54□□□□□ -1.04
HDGFL3-205ENST00000568129 F8VZ95 297 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms