RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CFHR5Q9BXR6 569 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 ADAMTS10Q9H324 1103 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 RAB6BQ9NRW1 208 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 HEY2Q9UBP5 337 aa17.39■□□□□ 0.37
CMTM3-213ENST00000566756 CITO14578 2027 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 COPEO14579 308 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 PYGBP11216 843 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 ARF4P18085 180 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-213ENST00000566756 HOXC8P31273 242 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 FLT3LGP49771 235 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 SNX16P57768 344 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 GJA9P57773 515 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 RBP5P82980 135 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 KRT81Q14533 505 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 DBN1Q16643 649 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 TRNP1Q6NT89 227 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 C4orf50Q6ZRC1 276 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 FAM183BPQ6ZVS7 135 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 ZC3H18Q86VM9 953 aaKnown RBP17.38■□□□□ 0.37
CMTM3-213ENST00000566756 TRIB2Q92519 343 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 FAM111AQ96PZ2 611 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 ARHGAP39Q9C0H5 1083 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 POPDC2Q9HBU9 364 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 NKX1-2Q9UD57 310 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-213ENST00000566756 DCTN4Q9UJW0 460 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 GABRQQ9UN88 632 aa17.38■□□□□ 0.37
CMTM3-213ENST00000566756 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 MYL3P08590 195 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 GM2AP17900 193 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 IL4RP24394 825 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 MAGEA3P43357 314 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 PURAQ00577 322 aaKnown RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 OR6B2Q6IFH4 312 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 ZDHHC17Q8IUH5 632 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 NAF1Q96HR8 494 aaKnown RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 KLF6Q99612 283 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 NT5C1AQ9BXI3 368 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TMEM120AQ9BXJ8 343 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 IQCGQ9H095 443 aaKnown RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 DENND2DQ9H6A0 471 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 KCNK4Q9NYG8 393 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 A0A0G2JND7 137 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 KCNN4O15554 427 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TSPAN1O60635 241 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 GPR32O75388 356 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 BCAR1P56945 870 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 BEX3Q00994 111 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TMEM132DQ14C87 1099 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TAF11Q15544 211 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 ATG16L1Q676U5 607 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 CYS1Q717R9 158 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 CDKL3Q8IVW4 592 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 PQLC3Q8N755 202 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 SRPK1Q96SB4 655 aaKnown RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 MIPEPQ99797 713 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 GCOM2Q9BZD3 368 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 UPF3AQ9H1J1 476 aaKnown RBP17.37■□□□□ 0.37
CMTM3-213ENST00000566756 PCDH18Q9HCL0 1135 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 ETNK2Q9NVF9 386 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TSPAN16Q9UKR8 245 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 PLLPQ9Y342 182 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 NUMBLQ9Y6R0 609 aa17.37■□□□□ 0.37
CMTM3-213ENST00000566756 TRIM49D1C9J1S8 452 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 E5RJQ4 531 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 ZBED1O96006 694 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 GNAT1P11488 350 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 CYP2C9P11712 490 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 TPSB2P20231 275 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 NDST1P52848 882 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 OVGP1Q12889 678 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 ORC1Q13415 861 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 BLMHQ13867 455 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 TPSAB1Q15661 275 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 CCDC14Q49A88 953 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 PKDCCQ504Y2 493 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 TAB3Q8N5C8 712 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-213ENST00000566756 UBA3Q8TBC4 463 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 CAPNS2Q96L46 248 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 SLC4A5Q9BY07 1137 aa17.36■□□□□ 0.37
CMTM3-213ENST00000566756 CADM1Q9BY67 442 aaKnown RBP17.36■□□□□ 0.37
CMTM3-213ENST00000566756 ZC3H7BQ9UGR2 993 aaKnown RBP17.36■□□□□ 0.37
CMTM3-213ENST00000566756 GSC2O15499 205 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CSDE1O75534 798 aaKnown RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 PIAS1O75925 651 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 KRT38O76015 456 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 APOEP02649 317 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 PFKMP08237 780 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 ZFXP17010 805 aaPredicted RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CYP3A5P20815 502 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 BGNP21810 368 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SERPINB9P50453 376 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SP3Q02447 781 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 SH3PXD2AQ5TCZ1 1133 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 OLFML1Q6UWY5 402 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 TMEM110Q86TL2 294 aa17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CAND1Q86VP6 1230 aaKnown RBP17.35■□□□□ 0.37
CMTM3-213ENST00000566756 CDR2LQ86X02 465 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms