RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 TNIP3Q96KP6 325 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 FTHL17Q9BXU8 183 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 CALN1Q9BXU9 219 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 PHACTR1Q9C0D0 580 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 TMEM30AQ9NV96 361 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 NKIRAS1Q9NYS0 192 aa11.24□□□□□ -0.61
PDXDC1-214ENST00000566633 POC1B-GALNT4F8VUJ3 575 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PAPSS1O43252 624 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 BANF1O75531 89 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 OR4Q2P0C623 313 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 STX2P32856 288 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 NDUFV1P49821 464 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 MAP3K7CLP57077 242 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 LRRC26Q2I0M4 334 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 MSS51Q4VC12 460 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FNBP1LQ5T0N5 605 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 NUGGCQ68CJ6 796 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FAM117BQ6P1L5 589 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PPP1R21Q6ZMI0 780 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ANKRD52Q8NB46 1076 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SEPT8Q92599 483 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 MAGEB18Q96M61 343 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ZMYND8Q9ULU4 1186 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RALGAPA2Q2PPJ7 1873 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FRMPD3Q5JV73 1810 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RANBP2P49792 3224 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FAM47DPA6NHR8 397 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RASSF9O75901 435 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ATP11AP98196 1134 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RASA2Q15283 850 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 STILQ15468 1287 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ARHGAP17Q68EM7 881 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TRPM8Q7Z2W7 1104 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 LRRTM3Q86VH5 581 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 CEP57Q86XR8 500 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FAM71DQ8N9W8 422 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 DENND1AQ8TEH3 1009 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SGSM3Q96HU1 749 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PPCSQ9HAB8 311 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TMEM161AQ9NX61 479 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SLC24A2Q9UI40 661 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 CLUHO75153 1309 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TCRBV7S3A2A0A539 114 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RBP3P10745 1247 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 COL6A1P12109 1028 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TFE3P19532 575 aaPredicted RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 GJA8P48165 433 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SLC18A1P54219 525 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 ARL4CP56559 192 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 PKN2Q16513 984 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 CAPN12Q6ZSI9 719 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 OR10T2Q8NGX3 314 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 SPATA18Q8TC71 538 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 RABGEF1Q9UJ41 708 aa11.23□□□□□ -0.61
PDXDC1-214ENST00000566633 E7ESA3 106 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 SMAPO00193 183 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 MCF2LO15068 1137 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 PRPF4O43172 522 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 ODC1P11926 461 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 STIP1P31948 543 aaKnown RBP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 FOXN2P32314 431 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 CDH6P55285 790 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 BST2Q10589 180 aaKnown RBP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 DPYSL3Q14195 570 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 EFHC2Q5JST6 749 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 DCLRE1AQ6PJP8 1040 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 OLFML1Q6UWY5 402 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 CLEC20AQ6ZU45 233 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 TMEM173Q86WV6 379 aaPredicted RBP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 URGCPQ8TCY9 931 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 PYROXD1Q8WU10 500 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 VWCEQ96DN2 955 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 CASD1Q96PB1 797 aa11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
PDXDC1-214ENST00000566633 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms