RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TMEM74BQ9NUR3 256 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 CALCOCO1Q9P1Z2 691 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 WDR35Q9P2L0 1181 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 FBXO10Q9UK96 956 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 TSPAN16Q9UKR8 245 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 CLEC4EQ9ULY5 219 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 ADAMTS9Q9P2N4 1935 aa24.92■■□□□ 1.58
RAB40C-209ENST00000565511 KMT2BQ9UMN6 2715 aaPredicted RBP24.92■■□□□ 1.58
RAB40C-209ENST00000565511 C4orf47A7E2U8 309 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 SMC2O95347 1197 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 PENKP01210 267 aaPredicted RBP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 CALCAP01258 141 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 DGKGP49619 791 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 TKTL1P51854 596 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 YWHAGP61981 247 aaKnown RBP eCLIP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 LRRC63Q05C16 580 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 N4BP2L1Q5TBK1 243 aaPredicted RBP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 FYB2Q5VWT5 728 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 PGBD3Q8N328 593 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 TTC39CQ8N584 583 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 KCNV2Q8TDN2 545 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 ZSWIM1Q9BR11 485 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 LSM14BQ9BX40 385 aaKnown RBP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 UBXN6Q9BZV1 441 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 CACNA2D2Q9NY47 1150 aa24.91■■□□□ 1.58
RAB40C-209ENST00000565511 ARMCX3Q9UH62 379 aaPredicted RBP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 AGO1Q9UL18 857 aaKnown RBP24.91■■□□□ 1.58
RAB40C-209ENST00000565511 GOLGA6L4A6NEF3 574 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 WASH3PC4AMC7 463 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 GABBR2O75899 941 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 NDUFV2P19404 249 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 IRX4P78413 519 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 PM20D1Q6GTS8 502 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 TRMT11Q7Z4G4 463 aaKnown RBP24.9■■□□□ 1.58
RAB40C-209ENST00000565511 DEFB119Q8N690 84 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 UBA3Q8TBC4 463 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 TFAP2BQ92481 460 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 SPACA7Q96KW9 195 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 TIGD1Q96MW7 591 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 GABRG3Q99928 467 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 MARCH2Q9P0N8 246 aa24.9■■□□□ 1.58
RAB40C-209ENST00000565511 O00370 1275 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 CDX4O14627 284 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-209ENST00000565511 XPO1O14980 1071 aaKnown RBP24.89■■□□□ 1.58
RAB40C-209ENST00000565511 FMO5P49326 533 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 NUCB2P80303 420 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 ADIGQ0VDE8 80 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 GEN1Q17RS7 908 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 LPCAT2Q7L5N7 544 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 CHPFQ8IZ52 775 aa24.89■■□□□ 1.58
RAB40C-209ENST00000565511 IPO4Q8TEX9 1081 aaKnown RBP24.89■■□□□ 1.58
RAB40C-209ENST00000565511 FAM124BQ9H5Z6 455 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-209ENST00000565511 PCDH15Q96QU1 1955 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 SLC12A8A0AV02 714 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 GIPC1O14908 333 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 KHNYNO15037 678 aaKnown RBP24.88■■□□□ 1.57
RAB40C-209ENST00000565511 GADD45BO75293 160 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-209ENST00000565511 KCNK5O95279 499 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 ZBED1O96006 694 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 CD19P15391 556 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 BCAT1P54687 386 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 MFAP3P55082 362 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 PREPLQ4J6C6 727 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-209ENST00000565511 PKDCCQ504Y2 493 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 SGO2Q562F6 1265 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 TTI2Q6NXR4 508 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 TADA2BQ86TJ2 420 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 DENND1CQ8IV53 801 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 DNAI2Q9GZS0 605 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 FSCN3Q9NQT6 498 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 CEP295Q9C0D2 2601 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 CKAP5Q14008 2032 aa24.88■■□□□ 1.57
RAB40C-209ENST00000565511 IGHV1OR15-9A0A0B4J2B8 117 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 PPP1R3GB7ZBB8 358 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 RNF225M0QZC1 329 aaPredicted RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 MAP3K13O43283 966 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 ITPKAP23677 461 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 PMLP29590 882 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 COG7P83436 770 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 BST2Q10589 180 aaKnown RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 BECN1Q14457 450 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 KLHL10Q6JEL2 608 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 RSRC2Q7L4I2 434 aaKnown RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 LMO3Q8TAP4 145 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 DDX1Q92499 740 aaKnown RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 EDEM1Q92611 657 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 CDK5RAP1Q96SZ6 601 aaKnown RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 USP24Q9UPU5 2620 aa24.87■■□□□ 1.57
RAB40C-209ENST00000565511 MUC22E2RYF6 1773 aaPredicted RBP24.87■■□□□ 1.57
RAB40C-209ENST00000565511 YJEFN3A6XGL0 299 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 E7ENQ6 273 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 PSAPL1Q6NUJ1 521 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 ARHGEF19Q8IW93 802 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 FAM217AQ8IXS0 508 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 ARHGAP18Q8N392 663 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 PIWIL1Q96J94 861 aaKnown RBP24.86■■□□□ 1.57
RAB40C-209ENST00000565511 SFMBT1Q9UHJ3 866 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 CYP8B1Q9UNU6 501 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 SLC27A6Q9Y2P4 619 aa24.86■■□□□ 1.57
RAB40C-209ENST00000565511 PIK3R2O00459 728 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms