RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 USP50Q70EL3 339 aaPredicted RBP20.71■□□□□ 0.91
MSLN-205ENST00000563941 NSMCE1Q8WV22 266 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 KBTBD7Q8WVZ9 684 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 QKIQ96PU8 341 aaKnown RBP eCLIP20.71■□□□□ 0.91
MSLN-205ENST00000563941 CSPG4P5Q96PW8 444 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 APOL6Q9BWW8 343 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 UGT1A7Q9HAW7 530 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 UGT1A10Q9HAW8 530 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 UGT1A8Q9HAW9 530 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 HEY2Q9UBP5 337 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 LNPEPQ9UIQ6 1025 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 MAD1L1Q9Y6D9 718 aa20.71■□□□□ 0.91
MSLN-205ENST00000563941 GPR32O75388 356 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 RECQL4O94761 1208 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 NR2C2P49116 596 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 ALKAL1Q6UXT8 129 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 MPP5Q8N3R9 675 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 CCDC185Q8N715 623 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 FAM13CQ8NE31 585 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 N4BP2L2Q92802 583 aaPredicted RBP20.7■□□□□ 0.9
MSLN-205ENST00000563941 SLC10A4Q96EP9 437 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 SIGLEC10Q96LC7 697 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 OSMRQ99650 979 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 TRIM56Q9BRZ2 755 aaKnown RBP20.7■□□□□ 0.9
MSLN-205ENST00000563941 TMEM120AQ9BXJ8 343 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 KCNK13Q9HB14 408 aa20.7■□□□□ 0.9
MSLN-205ENST00000563941 STRNO43815 780 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 HNRNPCL1O60812 293 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 TOMM70O94826 608 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 IL1BP01584 269 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 RPSAP08865 295 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 CSH1P0DML2 217 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 CSH2P0DML3 217 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 PTPN4P29074 926 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 ELF1P32519 619 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 SCNN1AP37088 669 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 BMPR2Q13873 1038 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 FBXO47Q5MNV8 452 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 ARCQ7LC44 396 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 GSDMBQ8TAX9 411 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 ZC3H15Q8WU90 426 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 MYCBPQ99417 103 aaPredicted RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 EBNA1BP2Q99848 306 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 SYT17Q9BSW7 474 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 TRIM6Q9C030 488 aaPredicted RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 UBQLN1Q9UMX0 589 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 MTO1Q9Y2Z2 717 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 RRN3P2A6NIE6 340 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 KLF11O14901 512 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 RFPL1O75677 317 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 HAUS5O94927 633 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 DLDP09622 509 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 AKAP5P24588 427 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 LMO2P25791 158 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 CCNFP41002 786 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 RPL34P49207 117 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 NCBP2-AS2Q69YL0 99 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 HEATR6Q6AI08 1181 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 TRMT10BQ6PF06 316 aaKnown RBP20.69■□□□□ 0.9
MSLN-205ENST00000563941 DPP9Q86TI2 863 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 CRYBG2Q8N1P7 616 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 APBB2Q92870 758 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 GTF2IRD1Q9UHL9 959 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 PLLPQ9Y342 182 aa20.69■□□□□ 0.9
MSLN-205ENST00000563941 DIAPH2O60879 1101 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 KRT38O76015 456 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 YBX3P16989 372 aaKnown RBP eCLIP20.68■□□□□ 0.9
MSLN-205ENST00000563941 EPHX2P34913 555 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 GNL1P36915 607 aaPredicted RBP20.68■□□□□ 0.9
MSLN-205ENST00000563941 MRPS5P82675 430 aaKnown RBP20.68■□□□□ 0.9
MSLN-205ENST00000563941 CDK16Q00536 496 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 C9orf131Q5VYM1 1079 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 GPATCH11Q8N954 259 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 PPP1R13LQ8WUF5 828 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 SKA1Q96BD8 255 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 DTLQ9NZJ0 730 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 MFHAS1Q9Y4C4 1052 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 FAM159BA6NKW6 160 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 PIRO00625 290 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 SPTLC1O15269 473 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 AMPD1P23109 780 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 SERPINB3P29508 390 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 GRIA1P42261 906 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 ACADSBP45954 432 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 SEMA5AQ13591 1074 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 MTBPQ96DY7 904 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 MAML3Q96JK9 1138 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 MECRQ9BV79 373 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 SNX25Q9H3E2 840 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 TLE6Q9H808 572 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 XAB2Q9HCS7 855 aaKnown RBP20.68■□□□□ 0.9
MSLN-205ENST00000563941 MKS1Q9NXB0 559 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.68■□□□□ 0.9
MSLN-205ENST00000563941 PCDHA11Q9Y5I1 949 aa20.68■□□□□ 0.9
MSLN-205ENST00000563941 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
MSLN-205ENST00000563941 KPNA7A9QM74 516 aa20.67■□□□□ 0.9
MSLN-205ENST00000563941 ADCY6O43306 1168 aa20.67■□□□□ 0.9
MSLN-205ENST00000563941 DNAJC6O75061 913 aa20.67■□□□□ 0.9
MSLN-205ENST00000563941 ECM2O94769 699 aaPredicted RBP20.67■□□□□ 0.9
MSLN-205ENST00000563941 GOT1P17174 413 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms