RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ADORA2AP29274 412 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 EEFSECP57772 596 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 NHLH1Q02575 133 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 HDAC1Q13547 482 aaPredicted RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 CCNIQ14094 377 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 UBE4AQ14139 1066 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SLC29A2Q14542 456 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 TBC1D25Q3MII6 688 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SUMO4Q6EEV6 95 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 PARS2Q7L3T8 475 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 AMIGO2Q86SJ2 522 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 R3HDM4Q96D70 268 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 STRBPQ96SI9 672 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 DHX36Q9H2U1 1008 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 DUSP22Q9NRW4 184 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 COL20A1Q9P218 1284 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 PCDHGB6Q9Y5F9 930 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SNX13Q9Y5W8 968 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 DOT1LQ8TEK3 1739 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 DISP2A7MBM2 1401 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SMG6Q86US8 1419 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 BTAF1O14981 1849 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 NSD2O96028 1365 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 KIF24Q5T7B8 1368 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 CCDC7Q96M83 1385 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 WDR17Q8IZU2 1322 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 NUP188Q5SRE5 1749 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 H0YIZ8 118 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 PSMD9O00233 223 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 RGS10O43665 173 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 JTBO76095 146 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 RASAL1O95294 804 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 KRT18P05783 430 aaKnown RBP5.8□□□□□ -1.48
LINC00254-201ENST00000563416 HNRNPCP07910 306 aaKnown RBP eCLIP5.8□□□□□ -1.48
LINC00254-201ENST00000563416 JUPP14923 745 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 MTHFSP49914 203 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 ARHGEF7Q14155 803 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 GALEQ14376 348 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 PCID2Q5JVF3 399 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 MTHFD1LQ6UB35 978 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 ZDHHC24Q6UX98 284 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 PTF1AQ7RTS3 328 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 KRT78Q8N1N4 520 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 SDR16C5Q8N3Y7 309 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 FANCBQ8NB91 859 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 RSPRY1Q96DX4 576 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 COG3Q96JB2 828 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 RPS6KC1Q96S38 1066 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 PNPLA8Q9NP80 782 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 DDX21Q9NR30 783 aaKnown RBP eCLIP5.8□□□□□ -1.48
LINC00254-201ENST00000563416 DLL3Q9NYJ7 618 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 SNX14Q9Y5W7 946 aa5.8□□□□□ -1.48
LINC00254-201ENST00000563416 TOGARAM1Q9Y4F4 1720 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 CGNL1Q0VF96 1302 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 LRRC3CA6NJW4 275 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 AQP7P3A6NL99 342 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 MASP2O00187 686 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 SRGAP2O75044 1071 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 TXNP10599 105 aaKnown RBP5.79□□□□□ -1.48
LINC00254-201ENST00000563416 ENGP17813 658 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 ACVR2AP27037 513 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 EPHA3P29320 983 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 BCAT1P54687 386 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 FCRLBQ6BAA4 426 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 CAND1Q86VP6 1230 aaKnown RBP5.79□□□□□ -1.48
LINC00254-201ENST00000563416 RAB11FIP4Q86YS3 637 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 ABHD11Q8NFV4 315 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 TMEM171Q8WVE6 324 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 PHKBQ93100 1093 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 UNKQ9C0B0 810 aaKnown RBP5.79□□□□□ -1.48
LINC00254-201ENST00000563416 FAM83DQ9H4H8 585 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 GBA2Q9HCG7 927 aaPredicted RBP5.79□□□□□ -1.48
LINC00254-201ENST00000563416 DNMT3BQ9UBC3 853 aaKnown RBP5.79□□□□□ -1.48
LINC00254-201ENST00000563416 COMMD10Q9Y6G5 202 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 SCN11AQ9UI33 1791 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 NCAPD2Q15021 1401 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 LY75O60449 1722 aa5.79□□□□□ -1.48
LINC00254-201ENST00000563416 TAF1LQ8IZX4 1826 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 MAP3K19Q56UN5 1328 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 RHPN2P1A8MT19 583 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 H7C4K7 107 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 PQBP1O60828 265 aaKnown RBP5.78□□□□□ -1.48
LINC00254-201ENST00000563416 PIAS2O75928 621 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TJP3O95049 919 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 MYL1P05976 194 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TPH1P17752 444 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 PTDSS1P48651 473 aaKnown RBP5.78□□□□□ -1.48
LINC00254-201ENST00000563416 CARSP49589 748 aaKnown RBP5.78□□□□□ -1.48
LINC00254-201ENST00000563416 CPT1AP50416 773 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 QSER1Q2KHR3 1735 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 MAP9Q49MG5 647 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TNS2Q63HR2 1409 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 SLC9A4Q6AI14 798 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 Q6ZWC4 215 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 DNAJB14Q8TBM8 379 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 HASPINQ8TF76 798 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms