RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 DCLK1O15075 740 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 SMC2O95347 1197 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 CALCAP01258 141 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 ADH5P11766 374 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 KIF11P52732 1056 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 FKBP3Q00688 224 aaKnown RBP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 AMPD2Q01433 879 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 LRRC63Q05C16 580 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 FBXO43Q4G163 708 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 C2orf27AQ580R0 203 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 EMC10Q5UCC4 262 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 TTI2Q6NXR4 508 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 MRPL14Q6P1L8 145 aaKnown RBP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 SYT13Q7L8C5 426 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 BHLHA9Q7RTU4 235 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 DDX42Q86XP3 938 aaKnown RBP eCLIP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 ETFBKMTQ8IXQ9 262 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC33Q8N5R6 958 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 KIAA1958Q8N8K9 716 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 NAT16Q8N8M0 369 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 GAB3Q8WWW8 586 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 NDRG1Q92597 394 aaKnown RBP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 TSG101Q99816 390 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 DUSP16Q9BY84 665 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 FBXO44Q9H4M3 255 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 ZFAND3Q9H8U3 227 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 CYLDQ9NQC7 956 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 TLR8Q9NR97 1041 aaKnown RBP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.8□□□□□ -1.16
ZEB1-223ENST00000561304 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 GMEB2Q9UKD1 530 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 USP18Q9UMW8 372 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 SLC8A2Q9UPR5 921 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 CTNND2Q9UQB3 1225 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 COQ4Q9Y3A0 265 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 SH3BP1Q9Y3L3 701 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
ZEB1-223ENST00000561304 MED19A0JLT2 244 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ESPNB1AK53 854 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 SGK1O00141 431 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 SLC9A3R1O14745 358 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ADAM23O75077 832 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ATG13O75143 517 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 RPP40O75818 363 aaKnown RBP7.79□□□□□ -1.16
ZEB1-223ENST00000561304 KAT7O95251 611 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 RARGP13631 454 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 KIR2DL1P43626 348 aaPredicted RBP7.79□□□□□ -1.16
ZEB1-223ENST00000561304 STX17P56962 302 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 LRMPQ12912 555 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 CUL2Q13617 745 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 MORC3Q14149 939 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 GOLGA7BQ2TAP0 167 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 RAB41Q5JT25 222 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ARHGAP17Q68EM7 881 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 KLHL10Q6JEL2 608 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 CEP68Q76N32 757 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC186Q7Z3E2 898 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 PIGZQ86VD9 579 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 TMEM25Q86YD3 366 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ALLCQ8N6M5 410 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 IL17RCQ8NAC3 791 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC150Q8NCX0 1101 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 MDGA1Q8NFP4 955 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 LMO3Q8TAP4 145 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 NELFBQ8WX92 580 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 KAT5Q92993 513 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 TMEM176AQ96HP8 235 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 HEXIM2Q96MH2 286 aaKnown RBP7.79□□□□□ -1.16
ZEB1-223ENST00000561304 ZSWIM1Q9BR11 485 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 TPSD1Q9BZJ3 242 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 SMOC1Q9H4F8 434 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 PNPLA8Q9NP80 782 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 NAGPAQ9UK23 515 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 RAB23Q9ULC3 237 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 MMP17Q9ULZ9 603 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 INVSQ9Y283 1065 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 PCDH15Q96QU1 1955 aa7.79□□□□□ -1.16
ZEB1-223ENST00000561304 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC163A0A0D9SF12 145 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-223ENST00000561304 PSMA7O14818 248 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 HOXC11O43248 304 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-223ENST00000561304 STX10O60499 249 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 TULP3O75386 442 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 STC2O76061 302 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 EPN2O95208 641 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 KLF8O95600 359 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-223ENST00000561304 APBB3O95704 486 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 KLKB1P03952 638 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 RETP07949 1114 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 HMBSP08397 361 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 CCDC192P0DO97 292 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 BCKDHBP21953 392 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 CNR2P34972 360 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 EIF2DP41214 584 aaKnown RBP7.78□□□□□ -1.16
ZEB1-223ENST00000561304 FMO5P49326 533 aa7.78□□□□□ -1.16
ZEB1-223ENST00000561304 PDE4CQ08493 712 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms