RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CKAP5Q14008 2032 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 CEP192Q8TEP8 1941 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 A0A0A0MRY4 1105 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 CCDC163A0A0D9SF12 145 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 SLC12A8A0AV02 714 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 THAP12O43422 761 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 MED7O43513 233 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 FBXO21O94952 628 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 MBD3O95983 291 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 LTFP02788 710 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 EEF1GP26641 437 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 CNR2P34972 360 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 GRIA2P42262 883 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 KIR2DL1P43626 348 aaPredicted RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 PXNP49023 591 aaPredicted RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 MRPS21P82921 87 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 SRSF5Q13243 272 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 C2orf27AQ580R0 203 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 BSPRYQ5W0U4 402 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 SMYD5Q6GMV2 418 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 DPY19L2P1Q6NXN4 242 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 MSANTD2Q6P1R3 559 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 DENND1BQ6P3S1 775 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 FMNL3Q8IVF7 1028 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 FAM217AQ8IXS0 508 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 ZNF606Q8WXB4 792 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 DCLK3Q9C098 648 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 DNAJC17Q9NVM6 304 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 DEC1Q9P2X7 70 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 CYTH4Q9UIA0 394 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 AGO1Q9UL18 857 aaKnown RBP11.45□□□□□ -0.58
SPG11-216ENST00000559347 ZNF510Q9Y2H8 683 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 NUP205Q92621 2012 aa11.45□□□□□ -0.58
SPG11-216ENST00000559347 TRIM24O15164 1050 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 MSI1O43347 362 aaKnown RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 HRO43593 1189 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 APBB3O95704 486 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 PENKP01210 267 aaPredicted RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 TIE1P35590 1138 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 TNFRSF4P43489 277 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 KCNMA1Q12791 1236 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 PDCLQ13371 301 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 TRIP4Q15650 581 aaPredicted RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 STX1AQ16623 288 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 HSF5Q4G112 596 aaPredicted RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 PREPLQ4J6C6 727 aaPredicted RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 C10orf76Q5T2E6 689 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 CCDC183Q5T5S1 534 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 FYB2Q5VWT5 728 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 LAIR1Q6GTX8 287 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 GRAMD4Q6IC98 578 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 PRR23BQ6ZRT6 265 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 DENND1CQ8IV53 801 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 CPXM2Q8N436 756 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 DCLK2Q8N568 766 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 RNF139Q8WU17 664 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 BHMTQ93088 406 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 HINFPQ9BQA5 517 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 MIS12Q9H081 205 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 ST7Q9NRC1 585 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 WDR35Q9P2L0 1181 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 NCDNQ9UBB6 729 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 SFMBT1Q9UHJ3 866 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 DNAJC12Q9UKB3 198 aa11.44□□□□□ -0.58
SPG11-216ENST00000559347 HBS1LQ9Y450 684 aaKnown RBP11.44□□□□□ -0.58
SPG11-216ENST00000559347 THADAQ6YHU6 1953 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 E5RJQ4 531 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 SGK1O00141 431 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 PES1O00541 588 aaKnown RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 SART1O43290 800 aaKnown RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 KLF8O95600 359 aaPredicted RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 IGLV3-27P01718 113 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 HNRNPLP14866 589 aaKnown RBP eCLIP11.43□□□□□ -0.58
SPG11-216ENST00000559347 CHKAP35790 457 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 USP8P40818 1118 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 ACADSBP45954 432 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 DGKGP49619 791 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 SIM2Q14190 667 aaPredicted RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 LPAL2Q16609 132 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 TOGARAM2Q6ZUX3 1019 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 RASSF3Q86WH2 238 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 CCDC33Q8N5R6 958 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 ZNF513Q8N8E2 541 aaPredicted RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 TXNDC5Q8NBS9 432 aaKnown RBP11.43□□□□□ -0.58
SPG11-216ENST00000559347 TSTD1Q8NFU3 115 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 STK32AQ8WU08 396 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 GAB3Q8WWW8 586 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 GOLGA1Q92805 767 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 SLC4A5Q9BY07 1137 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms