RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 E5RJQ4 531 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 EFSO43281 561 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 MBTPS2O43462 519 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 EIF4A3P38919 411 aaKnown RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CCR2P41597 374 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SERPINB4P48594 390 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 KIF11P52732 1056 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 NOMO3P69849 1222 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CYP4F8P98187 520 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 TNP2Q05952 138 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 PDCLQ13371 301 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SMAD4Q13485 552 aaKnown RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SLC5A9Q2M3M2 681 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 C2CD6Q53TS8 623 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 COX20Q5RI15 118 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 WDR59Q6PJI9 974 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CYP26C1Q6V0L0 522 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 GET4Q7L5D6 327 aaPredicted RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 PHLDB2Q86SQ0 1253 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 DNAAF5Q86Y56 855 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 TMC8Q8IU68 726 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 ITFG1Q8TB96 612 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 KCTD13Q8WZ19 329 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 ABHD17AQ96GS6 310 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 PPP1R13BQ96KQ4 1090 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 HSFY1Q96LI6 401 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CEP295NLQ96MC4 621 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SLITRK1Q96PX8 696 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CPXM1Q96SM3 734 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CHP1Q99653 195 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 LRRC3Q9BY71 257 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 SAP130Q9H0E3 1048 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 DEF6Q9H4E7 631 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 WDR6Q9NNW5 1121 aaKnown RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 EHD2Q9NZN4 543 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 GMIPQ9P107 970 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 ARHGAP20Q9P2F6 1191 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 UXTQ9UBK9 157 aaPredicted RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 BZW2Q9Y6E2 419 aaKnown RBP12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 CLUHO75153 1309 aa12.62□□□□□ -0.39
HMGB1P8-201ENST00000558211 DDX3XO00571 662 aaKnown RBP eCLIP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 ZNF197O14709 1029 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 LSM8O95777 96 aaKnown RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 ZBED1O96006 694 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 CYP1A1P04798 512 aaPredicted RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 POU2F2P09086 479 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 HNRNPH3P31942 346 aaKnown RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 SCNN1AP37088 669 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 ACADSBP45954 432 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 CBX2Q14781 532 aaPredicted RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TEAD2Q15562 447 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 MEA1Q16626 185 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 CLEC16AQ2KHT3 1053 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 LEXMQ3ZCV2 418 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 RAB41Q5JT25 222 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 OR6B2Q6IFH4 312 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 GAREM2Q75VX8 874 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 VPS36Q86VN1 386 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 SHKBP1Q8TBC3 707 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 MCRS1Q96EZ8 462 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TRMT2BQ96GJ1 504 aaKnown RBP12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 MYRFLQ96LU7 910 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 SLITRK6Q9H5Y7 841 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 TRPM5Q9NZQ8 1165 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 THEGQ9P2T0 379 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
HMGB1P8-201ENST00000558211 A0A1W2PQH9 124 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 AKR1B10O60218 316 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 ERBB2P04626 1255 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 UNGP13051 313 aaPredicted RBP12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 CEBPBP17676 345 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 CDC25CP30307 473 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 CDH5P33151 784 aaPredicted RBP12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 NSFP46459 744 aaKnown RBP12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 PGFP49763 221 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 HIF1AQ16665 826 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 STXBP5Q5T5C0 1151 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 GPR158Q5T848 1215 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 ACAD10Q6JQN1 1059 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 MMS22LQ6ZRQ5 1243 aa12.6□□□□□ -0.39
HMGB1P8-201ENST00000558211 CCDC186Q7Z3E2 898 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms