RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 BECN1Q14457 450 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 STARD3Q14849 445 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 DUOXA1Q1HG43 343 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 COBLL1Q53SF7 1204 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 DCAF17Q5H9S7 520 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 EGFLAMQ63HQ2 1017 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 SLC23A3Q6PIS1 610 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 Q6ZNB5 142 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 ARMCX6Q7L4S7 300 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 PIGZQ86VD9 579 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 SLC4A11Q8NBS3 891 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 MYO18AQ92614 2054 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 BHMTQ93088 406 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 IPO9Q96P70 1041 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 GABRG3Q99928 467 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 LRRC4Q9HBW1 653 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 OLA1Q9NTK5 396 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 CALCOCO1Q9P1Z2 691 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 ARMCX3Q9UH62 379 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 MBD1Q9UIS9 605 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 RASAL2Q9UJF2 1139 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
SNRPA1-204ENST00000558020 A0A1W2PQF6 199 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PATE3B3GLJ2 98 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PRRT4C9JH25 899 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 MDM4O15151 490 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 TRIM24O15164 1050 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 TIMM44O43615 452 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 NDUFS2O75306 463 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 ZBED1O96006 694 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 CFIP05156 583 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 CISD3P0C7P0 127 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 TBXAS1P24557 533 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PMLP29590 882 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 CORO1AP31146 461 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PPP1R2P41236 205 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 HARS2P49590 506 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 TKTL1P51854 596 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 BCAT1P54687 386 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 YWHAGP61981 247 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 GFPT1Q06210 699 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 CETN1Q12798 172 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 ST3GAL2Q16842 350 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 UAP1L1Q3KQV9 507 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SGO2Q562F6 1265 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 RAB41Q5JT25 222 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SYCP2LQ5T4T6 812 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SH3PXD2AQ5TCZ1 1133 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 FMR1NBQ8N0W7 255 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 FRMD1Q8N878 549 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 RNF139Q8WU17 664 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 TATDN2Q93075 761 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SLC32A1Q9H598 525 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PLK2Q9NYY3 685 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 FBXO10Q9UK96 956 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 SLC6A14Q9UN76 642 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 COQ4Q9Y3A0 265 aa14.27□□□□□ -0.13
SNRPA1-204ENST00000558020 CHD8Q9HCK8 2581 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 SLC12A8A0AV02 714 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 CDX4O14627 284 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 PSMA7O14818 248 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 SYNCRIPO60506 623 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 PENKP01210 267 aaPredicted RBP14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 KLKB1P03952 638 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 HMBSP08397 361 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 CD19P15391 556 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 ITPKAP23677 461 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 NUCB2P80303 420 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 CUL2Q13617 745 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 PM20D1Q6GTS8 502 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 DENND1CQ8IV53 801 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 HDDC3Q8N4P3 179 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 DDI1Q8WTU0 396 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 FOXJ1Q92949 421 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 PLD4Q96BZ4 506 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 ACOX2Q99424 681 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 TMEM74BQ9NUR3 256 aa14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 AGO1Q9UL18 857 aaKnown RBP14.26□□□□□ -0.13
SNRPA1-204ENST00000558020 XPO1O14980 1071 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 SYPP08247 313 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 SERPINF2P08697 491 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 VDRP11473 427 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 GNSP15586 552 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 ENGP17813 658 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 NDUFV2P19404 249 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 MAPK8P45983 427 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 ZNF445P59923 1031 aa14.25□□□□□ -0.13
SNRPA1-204ENST00000558020 ARID5AQ03989 594 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms