RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 PATE3B3GLJ2 98 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 PRRT4C9JH25 899 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 TM4SF5O14894 197 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 AP5Z1O43299 807 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 ZBED1O96006 694 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 GABRG2P18507 467 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-235ENST00000557740 CORO1AP31146 461 aaKnown RBP15.35■□□□□ 0.05
SHMT2-235ENST00000557740 CHKAP35790 457 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 BST2Q10589 180 aaKnown RBP15.35■□□□□ 0.05
SHMT2-235ENST00000557740 RAB41Q5JT25 222 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 TOGARAM2Q6ZUX3 1019 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 FRMD1Q8N878 549 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 IPO9Q96P70 1041 aaKnown RBP15.35■□□□□ 0.05
SHMT2-235ENST00000557740 TMEM9BQ9NQ34 198 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 MBD1Q9UIS9 605 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-235ENST00000557740 TSPAN16Q9UKR8 245 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 HCN2Q9UL51 889 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 COQ4Q9Y3A0 265 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 ABCA7Q8IZY2 2146 aa15.35■□□□□ 0.05
SHMT2-235ENST00000557740 CHD8Q9HCK8 2581 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 A0A1W2PQF6 199 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SLC12A8A0AV02 714 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 XPO1O14980 1071 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 KCNK5O95279 499 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 PENKP01210 267 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 KLKB1P03952 638 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 CYBBP04839 570 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 PTGER3P43115 390 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 NOVA1P51513 510 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 RPL6Q02878 288 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 LMAN2Q12907 356 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 LRMPQ12912 555 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 CCDC40Q4G0X9 1142 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 TRIM61Q5EBN2 209 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SPDYCQ5MJ68 293 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SLC36A4Q6YBV0 504 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SYT12Q8IV01 421 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SPATA20Q8TB22 786 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 SLC35C1Q96A29 364 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 ERLEC1Q96DZ1 483 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 TIGD1Q96MW7 591 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 ACOX2Q99424 681 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 NUSAP1Q9BXS6 441 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 ULBP1Q9BZM6 244 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 LRRC4Q9HBW1 653 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 METTL14Q9HCE5 456 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 OLA1Q9NTK5 396 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 CACNA2D2Q9NY47 1150 aa15.34■□□□□ 0.05
SHMT2-235ENST00000557740 EVLQ9UI08 416 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 ATXN2Q99700 1313 aaKnown RBP15.34■□□□□ 0.05
SHMT2-235ENST00000557740 CACNA1BQ00975 2339 aa15.33■□□□□ 0.05
SHMT2-235ENST00000557740 GFRA2O00451 464 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF217O75362 1048 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 CISD3P0C7P0 127 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 NDUFV2P19404 249 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 PPP1R2P41236 205 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 IRX4P78413 519 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 PDE4CQ08493 712 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 ADIGQ0VDE8 80 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 STARD3Q14849 445 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 N4BP2L1Q5TBK1 243 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-235ENST00000557740 PSAPL1Q6NUJ1 521 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 KIAA1211LQ6NV74 962 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 DENND1CQ8IV53 801 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 SIX6OS1Q8N1H7 587 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 UCMAQ8WVF2 138 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 PLD4Q96BZ4 506 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 CEP63Q96MT8 703 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 GABRG3Q99928 467 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 ANGPTL2Q9UKU9 493 aa15.33■□□□□ 0.04
SHMT2-235ENST00000557740 AGO1Q9UL18 857 aaKnown RBP15.33■□□□□ 0.04
SHMT2-235ENST00000557740 TULP2O00295 520 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 CFIP05156 583 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 SETSIPP0DME0 302 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 VDRP11473 427 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 HOXD12P35452 270 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 FMO5P49326 533 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 FYB2Q5VWT5 728 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 PM20D1Q6GTS8 502 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 KIAA1324Q6UXG2 1013 aaKnown RBP15.32■□□□□ 0.04
SHMT2-235ENST00000557740 ANKS1BQ7Z6G8 1248 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 RNF139Q8WU17 664 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 DHTKD1Q96HY7 919 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-235ENST00000557740 NT5C1BQ96P26 610 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 FBXO10Q9UK96 956 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 CYP8B1Q9UNU6 501 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 SLC27A6Q9Y2P4 619 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 RAD54BQ9Y620 910 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 THADAQ6YHU6 1953 aa15.32■□□□□ 0.04
SHMT2-235ENST00000557740 O00370 1275 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 NPC1O15118 1278 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 ITPKAP23677 461 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 PMLP29590 882 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 HARS2P49590 506 aaKnown RBP15.31■□□□□ 0.04
SHMT2-235ENST00000557740 MFAP3P55082 362 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 CETN1Q12798 172 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms