RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TPGS1Q6ZTW0 290 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 SIX6OS1Q8N1H7 587 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 ALLCQ8N6M5 410 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 GAB3Q8WWW8 586 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 SHC3Q92529 594 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 EDEM1Q92611 657 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 BBS2Q9BXC9 721 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 UBE2TQ9NPD8 197 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 CNGB3Q9NQW8 809 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 OLA1Q9NTK5 396 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 DNAJC17Q9NVM6 304 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 ANO10Q9NW15 660 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 EBF1Q9UH73 591 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 CYTH4Q9UIA0 394 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 AGO1Q9UL18 857 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 TNRC6BQ9UPQ9 1833 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 SPAG17Q6Q759 2223 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 SLC12A8A0AV02 714 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 AXIN1O15169 862 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 MSI1O43347 362 aaKnown RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 RPP40O75818 363 aaKnown RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 KLF8O95600 359 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 IGLV3-27P01718 113 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 CISD3P0C7P0 127 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 KRT5P13647 590 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 LCP1P13796 627 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 PON1P27169 355 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 TIE1P35590 1138 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 MTIF2P46199 727 aaKnown RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 MFAP3P55082 362 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 COG7P83436 770 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 EXOC3L4Q17RC7 722 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 HSF5Q4G112 596 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 ANO6Q4KMQ2 910 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 HSP90AA4PQ58FG1 418 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 BTBD8Q5XKL5 378 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 GRAMD4Q6IC98 578 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 RSRC2Q7L4I2 434 aaKnown RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 ENOSF1Q7L5Y1 443 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 FMNL3Q8IVF7 1028 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 CCDC33Q8N5R6 958 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 FAM160A2Q8N612 972 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 TXNDC5Q8NBS9 432 aaKnown RBP10.8□□□□□ -0.68
SHMT2-224ENST00000556737 RNF214Q8ND24 703 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 MDGA1Q8NFP4 955 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 TSTD1Q8NFU3 115 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 CCDC26Q8TAB7 109 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 PLD4Q96BZ4 506 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 DCLK3Q9C098 648 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 CD248Q9HCU0 757 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 ABCC13Q9NSE7 274 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 WDR35Q9P2L0 1181 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 DEC1Q9P2X7 70 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 FBXO10Q9UK96 956 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
SHMT2-224ENST00000556737 CACNA1AO00555 2505 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 PRRT4C9JH25 899 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 LTFP02788 710 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 FYNP06241 537 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 RETP07949 1114 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 PNMA6AP0CW24 399 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 GNA15P30679 374 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 CRY1Q16526 586 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 TPD52L1Q16890 204 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 C10orf76Q5T2E6 689 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 EGFLAMQ63HQ2 1017 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 CEP68Q76N32 757 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 DENND1CQ8IV53 801 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 CPXM2Q8N436 756 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 BHMTQ93088 406 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 TUBGCP2Q9BSJ2 902 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 TPSD1Q9BZJ3 242 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 NAT10Q9H0A0 1025 aaKnown RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 NDST4Q9H3R1 872 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 SAMSN1Q9NSI8 373 aaKnown RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 PLK2Q9NYY3 685 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 SFMBT1Q9UHJ3 866 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 DACH1Q9UI36 760 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 STOML2Q9UJZ1 356 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 GMEB2Q9UKD1 530 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 RAB23Q9ULC3 237 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 ZNF510Q9Y2H8 683 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 STARD13Q9Y3M8 1113 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 HBS1LQ9Y450 684 aaKnown RBP10.79□□□□□ -0.68
SHMT2-224ENST00000556737 CEP250Q9BV73 2442 aa10.79□□□□□ -0.68
SHMT2-224ENST00000556737 TBC1D3BA6NDS4 549 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 KCNJ18B7U540 433 aa10.78□□□□□ -0.68
SHMT2-224ENST00000556737 DCLK1O15075 740 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms