RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 GHRHRQ02643 423 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 FPGSQ05932 587 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 DCAF17Q5H9S7 520 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 LRCH2Q5VUJ6 765 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 FAM160B1Q5W0V3 765 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 METTL7BQ6UX53 244 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 APBB1IPQ7Z5R6 666 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 MRGPREQ86SM8 312 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TMEM199Q8N511 208 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 PIK3C3Q8NEB9 887 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 PPTC7Q8NI37 304 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 SLC25A43Q8WUT9 341 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 CHTF18Q8WVB6 975 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 ST8SIA2Q92186 375 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 ATP6V0A1Q93050 837 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TRIM43Q96BQ3 446 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 PGBD4Q96DM1 585 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TMX3Q96JJ7 454 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 INPP4AQ96PE3 977 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 AGAP2Q99490 1192 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 LLPHQ9BRT6 129 aaKnown RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 KATNAL1Q9BW62 490 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TEKT3Q9BXF9 490 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 HIPK3Q9H422 1215 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 RNPEPQ9H4A4 650 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 SMARCAD1Q9H4L7 1026 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 NRDE2Q9H7Z3 1164 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TBC1D22BQ9NU19 505 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 SETD4Q9NVD3 440 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 ING3Q9NXR8 418 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 USP36Q9P275 1121 aaKnown RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 DDX25Q9UHL0 483 aaKnown RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 ZNF215Q9UL58 517 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 KIF3AQ9Y496 699 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-243ENST00000556671 DMRT1Q9Y5R6 373 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 MICAL3Q7RTP6 2002 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 STK36Q9NRP7 1315 aa5.22□□□□□ -1.57
ATXN3-243ENST00000556671 TDRD15B5MCY1 1934 aaKnown RBP5.21□□□□□ -1.57
ATXN3-243ENST00000556671 PTPRSQ13332 1948 aa5.21□□□□□ -1.57
ATXN3-243ENST00000556671 NID2Q14112 1375 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 VPS37CA5D8V6 355 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 MSH4O15457 936 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 FAM20BO75063 409 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 PCDH8O95206 1070 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 TDP2O95551 362 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 FGBP02675 491 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 MMP1P03956 469 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 CYP3A4P08684 503 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SMIM10L2AP0DMW4 78 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SMIM10L2BP0DMW5 78 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 CSF2RAP15509 400 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 KCNA2P16389 499 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 THPOP40225 353 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 HMGN5P82970 282 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 BFSP2Q13515 415 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SHHQ15465 462 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 ZBTB41Q5SVQ8 909 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 GPR158Q5T848 1215 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 NCAPH2Q6IBW4 605 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 RHOUQ7L0Q8 258 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 MIER3Q7Z3K6 550 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 NEK8Q86SG6 692 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 LRRTM3Q86VH5 581 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 PASD1Q8IV76 773 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 HSCBQ8IWL3 235 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 DIS3L2Q8IYB7 885 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 RPUSD2Q8IZ73 545 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 METTL13Q8N6R0 699 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 CDYL2Q8N8U2 506 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 KAT2BQ92831 832 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 HAS1Q92839 578 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 LENG9Q96B70 501 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SENP7Q9BQF6 1050 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 FAM49AQ9H0Q0 323 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 NRBP2Q9NSY0 501 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 THG1LQ9NWX6 298 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 ERAP1Q9NZ08 941 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 GABBR1Q9UBS5 961 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 NOL7Q9UMY1 257 aaKnown RBP5.21□□□□□ -1.58
ATXN3-243ENST00000556671 PCDHB6Q9Y5E3 794 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 HTTP42858 3142 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 FRMPD4Q14CM0 1322 aa5.21□□□□□ -1.58
ATXN3-243ENST00000556671 SIP14410 1827 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 TANC1Q9C0D5 1861 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 A0A087WWV3 80 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 TMEM191CA6NGB0 347 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 ENPP3O14638 875 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 NRP1O14786 923 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 KIAA0355O15063 1070 aa5.2□□□□□ -1.58
ATXN3-243ENST00000556671 RAMP2O60895 175 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms