RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 BTBD1Q9H0C5 482 aa5.99□□□□□ -1.45
PRPF39-209ENST00000556353 NTN1O95631 604 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 TMEM225BP0DP42 221 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 PRF1P14222 555 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 COPAP53621 1224 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 CFHR1Q03591 330 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 FHL1Q13642 323 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 PFKFB3Q16875 520 aaPredicted RBP5.98□□□□□ -1.45
PRPF39-209ENST00000556353 RNF44Q7L0R7 432 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 P3H2Q8IVL5 708 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 FSTL5Q8N475 847 aaPredicted RBP5.98□□□□□ -1.45
PRPF39-209ENST00000556353 KAZALD1Q96I82 304 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 BRIP1Q9BX63 1249 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 OBP2AQ9NY56 170 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 FZD4Q9ULV1 537 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 PCDHGB6Q9Y5F9 930 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 SNX13Q9Y5W8 968 aa5.98□□□□□ -1.45
PRPF39-209ENST00000556353 ZMYM2Q9UBW7 1377 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 ANXA2P07355 339 aaKnown RBP5.97□□□□□ -1.45
PRPF39-209ENST00000556353 TACR3P29371 465 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 RPS13P62277 151 aaKnown RBP5.97□□□□□ -1.45
PRPF39-209ENST00000556353 YPEL5P62699 121 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 DEF8Q6ZN54 512 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 IRF2BP2Q7Z5L9 587 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 MBD3L2Q8NHZ7 208 aaPredicted RBP5.97□□□□□ -1.45
PRPF39-209ENST00000556353 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
PRPF39-209ENST00000556353 FAM227BQ96M60 508 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 WACQ9BTA9 647 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 UNKQ9C0B0 810 aaKnown RBP5.97□□□□□ -1.45
PRPF39-209ENST00000556353 NUP62CLQ9H1M0 184 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 TMEM184CQ9NVA4 438 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 KDM5BQ9UGL1 1544 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 ABCA8O94911 1581 aa5.97□□□□□ -1.45
PRPF39-209ENST00000556353 RAPGEF2Q9Y4G8 1499 aa5.96□□□□□ -1.45
PRPF39-209ENST00000556353 COL15A1P39059 1388 aa5.96□□□□□ -1.45
PRPF39-209ENST00000556353 LY6G6EA0A0G2JKS1 128 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 LOC105371045A0A1W2PR82 267 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 F8W8V4 182 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 FOXN3O00409 490 aaPredicted RBP5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TRIM38O00635 465 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 CA12O43570 354 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TLR2O60603 784 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 PRAMEF2O60811 474 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 CYP19A1P11511 503 aaPredicted RBP5.96□□□□□ -1.46
PRPF39-209ENST00000556353 YY1P25490 414 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 THBS4P35443 961 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 HSF1Q00613 529 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 CCDC15Q0P6D6 951 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TWIST1Q15672 202 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TRIM71Q2Q1W2 868 aaKnown RBP5.96□□□□□ -1.46
PRPF39-209ENST00000556353 ANKRD13BQ86YJ7 626 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 ANKRD13AQ8IZ07 590 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TTC8Q8TAM2 541 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 SELENOOQ9BVL4 669 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 ADGRE3Q9BY15 652 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 SLC25A32Q9H2D1 315 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 PNPLA8Q9NP80 782 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 HEYLQ9NQ87 328 aaPredicted RBP5.96□□□□□ -1.46
PRPF39-209ENST00000556353 PTPRGP23470 1445 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 SAMD9Q5K651 1589 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 PRXQ9BXM0 1461 aa5.96□□□□□ -1.46
PRPF39-209ENST00000556353 TNIKQ9UKE5 1360 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 EPRSP07814 1512 aaKnown RBP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 CFAP43Q8NDM7 1665 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 INSIG1O15503 277 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 WDR47O94967 919 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 CTSAP10619 480 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 ATF3P18847 181 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 HTR7P34969 479 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 JAK3P52333 1124 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 FOXG1P55316 489 aaPredicted RBP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 HTRA4P83105 476 aaPredicted RBP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 GALEQ14376 348 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 KPNB1Q14974 876 aaKnown RBP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 FAM110CQ1W6H9 321 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 SLC9C1Q4G0N8 1177 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 C14orf80Q86SX3 495 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 NUAK2Q9H093 628 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 FOXP1Q9H334 677 aaPredicted RBP5.95□□□□□ -1.46
PRPF39-209ENST00000556353 VPS45Q9NRW7 570 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 ARL8BQ9NVJ2 186 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 PLB1Q6P1J6 1458 aa5.95□□□□□ -1.46
PRPF39-209ENST00000556353 UACAQ9BZF9 1416 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 THAP12O43422 761 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 IL18RAPO95256 599 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 TMIGD3P0DMS9 266 aaPredicted RBP5.94□□□□□ -1.46
PRPF39-209ENST00000556353 SNHG28P0DPA3 235 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 SCP2P22307 547 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 GALNSP34059 522 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 STIM1Q13586 685 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 DNASE1L3Q13609 305 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 GRHL2Q6ISB3 625 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 UBE2Q1Q7Z7E8 422 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 KRT78Q8N1N4 520 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 NSMCE1Q8WV22 266 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 PHKBQ93100 1093 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 IQCDQ96DY2 449 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 VCPIP1Q96JH7 1222 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms