RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SART1O43290 800 aaKnown RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 RNF40O75150 1001 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 LTFP02788 710 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 TDGF1P13385 188 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 UCHL3P15374 230 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ZNF18P17022 549 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 PTMSP20962 102 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ACADSBP45954 432 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 CXCL12P48061 93 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 SATB1Q01826 763 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 CSTF1Q05048 431 aaKnown RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 GAD2Q05329 585 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 PTK2Q05397 1052 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 NCAPHQ15003 741 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 FKBP15Q5T1M5 1219 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 METTL3Q86U44 580 aaKnown RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 AOPEPQ8N6M6 819 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 RNF139Q8WU17 664 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 EZH1Q92800 747 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 GOLGA1Q92805 767 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 NELL1Q92832 810 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 PLD4Q96BZ4 506 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 BPIFA3Q9BQP9 254 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 NAA15Q9BXJ9 866 aaKnown RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 FAM126AQ9BYI3 521 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ST7Q9NRC1 585 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
SLIRP-205ENST00000556310 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 ZNF510Q9Y2H8 683 aa12.07□□□□□ -0.48
SLIRP-205ENST00000556310 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 CHURC1-FNTBB4DL54 471 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 PIK3R2O00459 728 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 PNMA6AP0CW24 399 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 CORO1AP31146 461 aaKnown RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 MRE11P49959 708 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 BPIFB4P59827 614 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 PDCLQ13371 301 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 TSSK4Q6SA08 328 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 NUDT18Q6ZVK8 323 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 C12orf40Q86WS4 652 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 ETFBKMTQ8IXQ9 262 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 EDEM1Q92611 657 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 MIS12Q9H081 205 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 GANQ9H2C0 597 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 HSD3B7Q9H2F3 369 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 MARK1Q9P0L2 795 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 CYTH4Q9UIA0 394 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 HBS1LQ9Y450 684 aaKnown RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 PCDHGA2Q9Y5H1 932 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 R4GN57 208 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 RIF1Q5UIP0 2472 aaKnown RBP12.06□□□□□ -0.48
SLIRP-205ENST00000556310 FAM186AA6NE01 2351 aa12.06□□□□□ -0.48
SLIRP-205ENST00000556310 E5RJQ4 531 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 F8VZ95 297 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 CACNG3O60359 315 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ATG13O75143 517 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 KLKB1P03952 638 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 HMBSP08397 361 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 CLCN1P35523 988 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 NRLP54845 237 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 TRIP4Q15650 581 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ANO4Q32M45 955 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 PREPLQ4J6C6 727 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-205ENST00000556310 PKN3Q6P5Z2 889 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 SLC47A2Q86VL8 602 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 TMEM25Q86YD3 366 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ZBTB44Q8NCP5 570 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 NKD2Q969F2 451 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ACDQ96AP0 544 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 PNKPQ96T60 521 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 FUCA2Q9BTY2 467 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 TRIM62Q9BVG3 475 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 LHX5Q9H2C1 402 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 SEMA4AQ9H3S1 761 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ARHGEF4Q9NR80 690 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 WDR35Q9P2L0 1181 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 SIK3Q9Y2K2 1263 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 CEP83Q9Y592 693 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 GVINP1Q7Z2Y8 2422 aa12.05□□□□□ -0.48
SLIRP-205ENST00000556310 ZNF292O60281 2723 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 OTOGLQ3ZCN5 2332 aa12.04□□□□□ -0.48
SLIRP-205ENST00000556310 PRR23AA6NEV1 266 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms