RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 BLOC1S2Q6QNY1 142 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 SLC36A4Q6YBV0 504 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 EFCAB13Q8IY85 973 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 TXNDC5Q8NBS9 432 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 HMGB4Q8WW32 186 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 KIFAP3Q92845 792 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 JAKMIP1Q96N16 626 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 MTMR9Q96QG7 549 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 KIF2CQ99661 725 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 TCHPQ9BT92 498 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 TARS2Q9BW92 718 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 MRPL4Q9BYD3 311 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 ZCWPW1Q9H0M4 648 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 GSX1Q9H4S2 264 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 PLEKHA5Q9HAU0 1116 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 TUFT1Q9NNX1 390 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 BCCIPQ9P287 314 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 PCOLCE2Q9UKZ9 415 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 WNT6Q9Y6F9 365 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 ARHGEF35A5YM69 484 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 CAPN8A6NHC0 703 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 CAPN9O14815 690 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 MED24O75448 989 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 KLF8O95600 359 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 NFATC1O95644 943 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 CTSBP07858 339 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 NFICP08651 508 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ITPKBP27987 946 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 CDR1P51861 262 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 LILRA4P59901 499 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 PLEKHG6Q3KR16 790 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 EOGTQ5NDL2 527 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 DYMQ7RTS9 669 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 MARCH9Q86YJ5 346 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 GALNT15Q8N3T1 639 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ALLCQ8N6M5 410 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 SPPL2BQ8TCT7 592 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 SETD7Q8WTS6 366 aaKnown RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 C2orf15Q8WU43 125 aaKnown RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ZBTB45Q96K62 511 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 SENP8Q96LD8 212 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 CYP2S1Q96SQ9 504 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 FAM129BQ96TA1 746 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 TRIM56Q9BRZ2 755 aaKnown RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ZDHHC5Q9C0B5 715 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 ACSS3Q9H6R3 686 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 UBQLN1Q9UMX0 589 aaKnown RBP7.38□□□□□ -1.23
ATXN3-236ENST00000556220 MGAQ8IWI9 3026 aa7.38□□□□□ -1.23
ATXN3-236ENST00000556220 PIEZO2Q9H5I5 2752 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 MYO18AQ92614 2054 aaKnown RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 KIF26AQ9ULI4 1882 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 PHLPP2Q6ZVD8 1323 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 TCRBV21S2A2A0A5A6 115 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 MYMKA6NI61 221 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CCDC169A6NNP5 214 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 E9PAM4 449 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 USP17L7P0C7H9 530 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 ATXN1LP0C7T5 689 aaKnown RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CSH1P0DML2 217 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CSH2P0DML3 217 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 ODC1P11926 461 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 HARSP12081 509 aaKnown RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 TCF3P15923 654 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 XBP1P17861 261 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 PAX3P23760 479 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 RPA1P27694 616 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 NPTX2P47972 431 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SLC6A11P48066 632 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SERPINB4P48594 390 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 PEX3P56589 373 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CFHR1Q03591 330 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SPAG1Q07617 926 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SCRN1Q12765 414 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 GAB4Q2WGN9 574 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SEZ6Q53EL9 994 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 EMC10Q5UCC4 262 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CPLX2Q6PUV4 134 aaKnown RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CENPQQ7L2Z9 268 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SLC41A1Q8IVJ1 513 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SFTPA1Q8IWL2 248 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SH3RF2Q8TEC5 729 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 LRRC15Q8TF66 581 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 ZNF274Q96GC6 653 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 ZNF419Q96HQ0 510 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 HNRNPABQ99729 332 aaKnown RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 PI4K2AQ9BTU6 479 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 FAM124BQ9H5Z6 455 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 CLMPQ9H6B4 373 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 TMEM206Q9H813 350 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms