RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 RBPJLQ9UBG7 517 aa15.35■□□□□ 0.05
CUX1-215ENST00000556210 CNTNAP2Q9UHC6 1331 aa15.35■□□□□ 0.05
CUX1-215ENST00000556210 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
CUX1-215ENST00000556210 GPC4O75487 556 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 CUL3Q13618 768 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 SLC12A1Q13621 1099 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 MMEL1Q495T6 779 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 FASTKD1Q53R41 847 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 ZNF484Q5JVG2 852 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 HABP4Q5JVS0 413 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 ADGRF2Q8IZF7 708 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 LPPQ93052 612 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 DCLRE1BQ9H816 532 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 SPON1Q9HCB6 807 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 PRG3Q9Y2Y8 225 aaPredicted RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 KIF3CO14782 793 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 ALOX15BO15296 676 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 GAS2O43903 313 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 ZMPSTE24O75844 475 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 LMO2P25791 158 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 ASPAP45381 313 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 TAF6P49848 677 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 TKTL1P51854 596 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 MFSD5Q6N075 450 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 RNF148Q8N7C7 305 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 TTC8Q8TAM2 541 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 PDCD6IPQ8WUM4 868 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 PLEKHA5Q9HAU0 1116 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 ANGPTL2Q9UKU9 493 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 ECM29Q5VYK3 1845 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 AIM2O14862 343 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 BNIP3LO60238 219 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 VHLP40337 213 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 ZNF143P52747 638 aaPredicted RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 RASA2Q15283 850 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 TRIM42Q8IWZ5 723 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 C2orf69Q8N8R5 385 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 NIFKQ9BYG3 293 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 MROH8Q9H579 483 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 SLC24A2Q9UI40 661 aa15.34■□□□□ 0.05
CUX1-215ENST00000556210 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.34■□□□□ 0.05
CUX1-215ENST00000556210 TNPO2O14787 897 aaKnown RBP15.33■□□□□ 0.05
CUX1-215ENST00000556210 MCF2P10911 925 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 CASP2P42575 452 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 PRPSAP1Q14558 356 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 RNASEH2BQ5TBB1 312 aaKnown RBP15.33■□□□□ 0.05
CUX1-215ENST00000556210 WSCD1Q658N2 575 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 ZNF560Q96MR9 790 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 CYTH4Q9UIA0 394 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 DNAJC16Q9Y2G8 782 aa15.33■□□□□ 0.05
CUX1-215ENST00000556210 KPNA7A9QM74 516 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 TRPA1O75762 1119 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ITGAVP06756 1048 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ZCCHC18P0CG32 403 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 PSEN1P49768 467 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 SLC6A3Q01959 620 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 RABGAP1LQ5R372 815 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 TRMT10BQ6PF06 316 aaKnown RBP15.33■□□□□ 0.04
CUX1-215ENST00000556210 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.04
CUX1-215ENST00000556210 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 WDTC1Q8N5D0 677 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.04
CUX1-215ENST00000556210 GAD1Q99259 594 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 USP17L7P0C7H9 530 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 PTDSS1P48651 473 aaKnown RBP15.33■□□□□ 0.04
CUX1-215ENST00000556210 OLIG2Q13516 323 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 RNF43Q68DV7 783 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 TTC7BQ86TV6 843 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 METTL23Q86XA0 190 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 NSL1Q96IY1 281 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ZNF570Q96NI8 536 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ASB7Q9H672 318 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 TASP1Q9H6P5 420 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 E9PBE3 544 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 FCHO1O14526 889 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 KLHL41O60662 606 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 PTPN4P29074 926 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 PAPOLAP51003 745 aaKnown RBP15.33■□□□□ 0.04
CUX1-215ENST00000556210 ITGA9Q13797 1035 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 SNX30Q5VWJ9 437 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 C4orf50Q6ZRC1 276 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 SPATA6LQ8N4H0 392 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 BHMTQ93088 406 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 TBCBQ99426 244 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ADAM7Q9H2U9 754 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 MAN1C1Q9NR34 630 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 ETNK2Q9NVF9 386 aa15.33■□□□□ 0.04
CUX1-215ENST00000556210 SLX4Q8IY92 1834 aa15.32■□□□□ 0.04
CUX1-215ENST00000556210 LYPLA1O75608 230 aaPredicted RBP15.32■□□□□ 0.04
CUX1-215ENST00000556210 ETFBP38117 255 aa15.32■□□□□ 0.04
CUX1-215ENST00000556210 GRIK1P39086 918 aa15.32■□□□□ 0.04
CUX1-215ENST00000556210 HUNKP57058 714 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms