RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 FNIP2Q9P278 1114 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 ATP11BQ9Y2G3 1177 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 PCDHGA2Q9Y5H1 932 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 ATP8B3O60423 1300 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 MAGEB6P1A0A0J9YX57 407 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 EXOC1LA0A1B0GW35 172 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 SYCE1LA8MT33 242 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 MIF4GDA9UHW6 222 aaKnown RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 TRIM77I1YAP6 450 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 CIB2O75838 187 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 CLPTM1O96005 669 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 TFAP2AP05549 437 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 APEHP13798 732 aaKnown RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 HOXB1P14653 301 aaPredicted RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 RAP1GDS1P52306 607 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 CHN2P52757 468 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 AQP4P55087 323 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 MRPS5P82675 430 aaKnown RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 MESDQ14696 234 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 STAT4Q14765 748 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 NONOQ15233 471 aaKnown RBP eCLIP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 NADK2Q4G0N4 442 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 HERC4Q5GLZ8 1057 aaPredicted RBP10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 RNF207Q6ZRF8 634 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 NEK8Q86SG6 692 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 COLGALT2Q8IYK4 626 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 NUP93Q8N1F7 819 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 ZFP28Q8NHY6 868 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 SCFD1Q8WVM8 642 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 DNAJC19Q96DA6 116 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 HDAC11Q96DB2 347 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 SLC47A1Q96FL8 570 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 OSBPL8Q9BZF1 889 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 TRIM8Q9BZR9 551 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 ARMC7Q9H6L4 198 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 SIX2Q9NPC8 291 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 GCNT4Q9P109 453 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 POLHQ9Y253 713 aa10.69□□□□□ -0.7
EFCAB11-208ENST00000555872 KLRG2A4D1S0 409 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 POM121CA8CG34 1229 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 XPO1O14980 1071 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 PFDN6O15212 129 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 PRPF4O43172 522 aaKnown RBP eCLIP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 GGPS1O95749 300 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 SERPINB2P05120 415 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 MTHFD1P11586 935 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 COMTP21964 271 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 GNL1P36915 607 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 GNALP38405 381 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ECE1P42892 770 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 RPL5P46777 297 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 BCAP31P51572 246 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 RPS8P62241 208 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CHRNDQ07001 517 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 NR1H3Q13133 447 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 SSPNQ14714 243 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 MAPRE2Q15555 327 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CYP1B1Q16678 543 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 RNF169Q8NCN4 708 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 OLIG1Q8TAK6 271 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ZNF398Q8TD17 642 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CAMKK2Q96RR4 588 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 THTPAQ9BU02 230 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 MKNK1Q9BUB5 465 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 KIAA1586Q9HCI6 787 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CYP26B1Q9NR63 512 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 PRKAG2Q9UGJ0 569 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ANAPC5Q9UJX4 755 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 RSPH10B2B2RC85 870 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 USP17L12C9JPN9 530 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 USP17L21D6R901 530 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 GOLGA8RI6L899 631 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 POLRMTO00411 1230 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ALOX5P09917 674 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 RSPH10BP0C881 870 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 SMIM18P0DKX4 95 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ATP6V1B1P15313 513 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 M6PRP20645 277 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 AXLP30530 894 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 HADHAP40939 763 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 ACTR3P61158 418 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 SIX1Q15475 284 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 SGO2Q562F6 1265 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 TTBK2Q6IQ55 1244 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 NET1Q7Z628 596 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 CPNE8Q86YQ8 564 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 NAT8LQ8N9F0 302 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 KCT2Q8NC54 265 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 BTBD2Q9BX70 525 aa10.68□□□□□ -0.7
EFCAB11-208ENST00000555872 TRIM55Q9BYV6 548 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms