RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 DDIT4Q9NX09 232 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 NUDT5Q9UKK9 219 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 TTC7AQ9ULT0 858 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 INSL5Q9Y5Q6 135 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 GOLGA6L10A0A0M3HER8 536 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 FAM92AA1XBS5 289 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 C2orf71A6NGG8 1288 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 HIDE1A8MVS5 230 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 GLUD1P00367 558 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 LRG1P02750 347 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 RARGP13631 454 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 PGFP49763 221 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 OTUD1Q5VV17 481 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 CCDC149Q6ZUS6 474 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 TAC4Q86UU9 113 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 ITIH5Q86UX2 942 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 RFX6Q8HWS3 928 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 MAP7D3Q8IWC1 876 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 KLHL7Q8IXQ5 586 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 CCDC185Q8N715 623 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 KREMEN2Q8NCW0 462 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 PDZD8Q8NEN9 1154 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 CMASQ8NFW8 434 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 TEKT4Q8WW24 435 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 CALN1Q9BXU9 219 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 DHX35Q9H5Z1 703 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 RBM12Q9NTZ6 932 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 PIGVQ9NUD9 493 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 AP4E1Q9UPM8 1137 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 IRAK3Q9Y616 596 aa10.05□□□□□ -0.8
HNRNPC-220ENST00000555585 H3BNC9 293 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CCDC188H7C350 402 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 FSCN2O14926 492 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 MDM4O15151 490 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CD48P09326 243 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 KRT10P13645 584 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 IRS1P35568 1242 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CDKN2BP42772 138 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 TERF1P54274 439 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 TUBB4BP68371 445 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ITIH3Q06033 890 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 EFEMP1Q12805 493 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PDK2Q15119 407 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PPP2R5EQ16537 467 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CA9Q16790 459 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ERCC6LQ2NKX8 1250 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ARL13BQ3SXY8 428 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 TFDP3Q5H9I0 405 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PPP6R3Q5H9R7 873 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 EFHC2Q5JST6 749 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CCDC70Q6NSX1 233 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 MSANTD2Q6P1R3 559 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 LILRA6Q6PI73 481 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 BNIPLQ7Z465 357 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ELMOD1Q8N336 334 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 MMGT1Q8N4V1 131 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 NOA1Q8NC60 698 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ARNTL2Q8WYA1 636 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 OVCA2Q8WZ82 227 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CASP10Q92851 521 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PGAP3Q96FM1 320 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 KRT12Q99456 494 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 MAK16Q9BXY0 300 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 SMOC2Q9H3U7 446 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 WDCPQ9H6R7 721 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 PCDH18Q9HCL0 1135 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 OLA1Q9NTK5 396 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 OSER1Q9NX31 292 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 CLIC5Q9NZA1 410 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 SFMBT1Q9UHJ3 866 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 RASAL2Q9UJF2 1139 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 FZD10Q9ULW2 581 aa10.04□□□□□ -0.8
HNRNPC-220ENST00000555585 COL4A4P53420 1690 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 hCG_1818297A0A087WSY0 165 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TCRBV7S2A1N4TA0A589 114 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 C3orf70A6NLC5 250 aaPredicted RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 IRAK2O43187 625 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 MSI1O43347 362 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 TJP3O95049 919 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 C8AP07357 584 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 RHOXF2BP0C7M4 288 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 HMGA1P17096 107 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 L1CAMP32004 1257 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 PTPN7P35236 360 aa10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 GTF2F1P35269 517 aaKnown RBP eCLIP10.03□□□□□ -0.8
HNRNPC-220ENST00000555585 ADRA1BP35368 520 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms