RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SELENOOQ9BVL4 669 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 USP29Q9HBJ7 922 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 COL20A1Q9P218 1284 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 CAPN11Q9UMQ6 739 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
SNX6-204ENST00000555541 COL15A1P39059 1388 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 A0A1W2PPC1 479 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 SLC22A23A1A5C7 686 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 FAM227AF5H4B4 570 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 CTIFO43310 598 aaKnown RBP4.32□□□□□ -1.72
SNX6-204ENST00000555541 MARCH6O60337 910 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 NDUFB8O95169 186 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 U2AF1L5P0DN76 240 aaPredicted RBP4.32□□□□□ -1.72
SNX6-204ENST00000555541 T-ENOLP0DO92 83 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 CD19P15391 556 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 BTF3P20290 206 aaKnown RBP4.32□□□□□ -1.72
SNX6-204ENST00000555541 TNFRSF8P28908 595 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 U2AF1Q01081 240 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNX6-204ENST00000555541 C3orf38Q5JPI3 329 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 TTLL5Q6EMB2 1281 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 APOA5Q6Q788 366 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 FAM57BQ71RH2 274 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 CHST8Q9H2A9 424 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 SACM1LQ9NTJ5 587 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 MSRB1Q9NZV6 116 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 STEAP1Q9UHE8 339 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 L1RE1Q9UN81 338 aa4.32□□□□□ -1.72
SNX6-204ENST00000555541 PRPF3O43395 683 aaKnown RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 FRS3O43559 492 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 NGFRP08138 427 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 CD63P08962 238 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 TXNP10599 105 aaKnown RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 RPS6KB1P23443 525 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 GALNSP34059 522 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 IL6STP40189 918 aaPredicted RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 CPT1AP50416 773 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 INPP5JQ15735 1006 aaPredicted RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 FAM102BQ5T8I3 360 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 MANEALQ5VSG8 457 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 GSG1LQ6UXU4 331 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 FAM71DQ8N9W8 422 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 NLRP4Q96MN2 994 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 STK31Q9BXU1 1019 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 MRPL44Q9H9J2 332 aaKnown RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 MID2Q9UJV3 735 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 NOB1Q9ULX3 412 aaKnown RBP4.31□□□□□ -1.72
SNX6-204ENST00000555541 COG5Q9UP83 839 aa4.31□□□□□ -1.72
SNX6-204ENST00000555541 TMEM272A0A1B0GTI8 110 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 ISM1B1AKI9 464 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 RASSF9O75901 435 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 GAS8-AS1O95177 125 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 SCGB1D2O95969 90 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 ACVR2AP27037 513 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 JAK3P52333 1124 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 EIF4A1P60842 406 aaKnown RBP4.3□□□□□ -1.72
SNX6-204ENST00000555541 FMO1Q01740 532 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 STK3Q13188 491 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 SLC29A2Q14542 456 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 KCNAB1Q14722 419 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 CLCA4Q14CN2 919 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 CNN3Q15417 329 aaKnown RBP4.3□□□□□ -1.72
SNX6-204ENST00000555541 NFE2Q16621 373 aaPredicted RBP4.3□□□□□ -1.72
SNX6-204ENST00000555541 ST3GAL2Q16842 350 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 PLEKHG6Q3KR16 790 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 PLAG1Q6DJT9 500 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 RBM44Q6ZP01 1051 aaKnown RBP4.3□□□□□ -1.72
SNX6-204ENST00000555541 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNX6-204ENST00000555541 HIST1H2AAQ96QV6 131 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 FAM83DQ9H4H8 585 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 C1orf112Q9NSG2 853 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 TXLNGQ9NUQ3 528 aa4.3□□□□□ -1.72
SNX6-204ENST00000555541 CFAP69A5D8W1 941 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 RAB27BO00194 218 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 SPTLC2O15270 562 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 TMIGD3P0DMS9 266 aaPredicted RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 POLD2P49005 469 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 RPS16P62249 146 aaKnown RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 GAB1Q13480 694 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 CNGA2Q16280 664 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 PRTGQ2VWP7 1150 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 MINDY4Q4G0A6 757 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 NXNQ6DKJ4 435 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 RFX8Q6ZV50 586 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 TCEAL8Q8IYN2 117 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 MAGEB6Q8N7X4 407 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 SLC44A5Q8NCS7 719 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 NGDNQ8NEJ9 315 aaKnown RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 ZNF668Q96K58 619 aaPredicted RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 FAM84BQ96KN1 310 aaPredicted RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 AS3MTQ9HBK9 375 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 MOV10Q9HCE1 1003 aaKnown RBP4.29□□□□□ -1.72
SNX6-204ENST00000555541 DNAJB11Q9UBS4 358 aa4.29□□□□□ -1.72
SNX6-204ENST00000555541 AQP7P3A6NL99 342 aa4.28□□□□□ -1.72
SNX6-204ENST00000555541 A6NNZ2 444 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms