RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 ABCC13Q9NSE7 274 aa12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PLK2Q9NYY3 685 aa12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NAALADL1Q9UQQ1 740 aa12.99□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 MYOFQ9NZM1 2061 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 USP34Q70CQ2 3546 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 WDR87Q6ZQQ6 2873 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 E5RJQ4 531 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 K7ESF4 209 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 MSI1O43347 362 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FBXO21O94952 628 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 LTFP02788 710 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CORO1AP31146 461 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 KRT9P35527 623 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CCR3P51677 355 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 KDSRQ06136 332 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TAF5Q15542 800 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZNF528Q3MIS6 628 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 SYPL2Q5VXT5 272 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ASCL5Q7RTU5 278 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 DHX40Q8IX18 779 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 RPLP0P6Q8NHW5 317 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 STK32AQ8WU08 396 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 IRGQQ8WZA9 623 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NELL1Q92832 810 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 GANQ9H2C0 597 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZDHHC4Q9NPG8 344 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FAM207AQ9NSI2 230 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
TRAPPC6B-205ENST00000555269 A0A0A0MRY4 1105 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 SYCE3A1L190 88 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CHURC1-FNTBB4DL54 471 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NEDD8-MDP1E9PL57 170 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 HOXC11O43248 304 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TULP3O75386 442 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 KAT7O95251 611 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TPM2P07951 284 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TYRP14679 529 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CYP11B1P15538 503 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ACADSBP45954 432 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FNTBP49356 437 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 POLR2FP61218 127 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 UBXN1Q04323 297 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PDCLQ13371 301 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 SYCP1Q15431 976 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TRIP4Q15650 581 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FKBP15Q5T1M5 1219 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PHTF2Q8N3S3 785 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CCDC33Q8N5R6 958 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 EXOC4Q96A65 974 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FAM149B1Q96BN6 582 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PPP1R13BQ96KQ4 1090 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CPXM1Q96SM3 734 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 BBS2Q9BXC9 721 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NAT10Q9H0A0 1025 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 LHX5Q9H2C1 402 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NLRC4Q9NPP4 1024 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 OLA1Q9NTK5 396 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZSCAN32Q9NX65 697 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 WDR35Q9P2L0 1181 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 DEC1Q9P2X7 70 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PCDHGC3Q9UN70 934 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PATJQ8NI35 1801 aa12.97□□□□□ -0.33
TRAPPC6B-205ENST00000555269 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TBC1D3BA6NDS4 549 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TEX33O43247 280 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 TSPAN3O60637 253 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ATG13O75143 517 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 GFPT2O94808 682 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 APODP05090 189 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NCAM1P13591 858 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 GRIA2P42262 883 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZNF165P49910 485 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 BPIFB4P59827 614 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 SRSF5Q13243 272 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ZBTB44Q8NCP5 570 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 C1orf131Q8NDD1 294 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 DDX1Q92499 740 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 NKD2Q969F2 451 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PIWIL1Q96J94 861 aaKnown RBP12.96□□□□□ -0.33
TRAPPC6B-205ENST00000555269 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms