RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ACADSBP45954 432 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 HARS2P49590 506 aaKnown RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 DMWDQ09019 674 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 KRT31Q15323 416 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 LPAL2Q16609 132 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PREPLQ4J6C6 727 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 GRAMD4Q6IC98 578 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 NUDT18Q6ZVK8 323 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 CEP68Q76N32 757 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PASD1Q8IV76 773 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 SCUBE3Q8IX30 993 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 ZBTB44Q8NCP5 570 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 CLEC4CQ8WTT0 213 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 IRGQQ8WZA9 623 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 SHC3Q92529 594 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 EZH1Q92800 747 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PLD4Q96BZ4 506 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PCMTD1Q96MG8 357 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 HHIPQ96QV1 700 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 SIX2Q9NPC8 291 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PLK2Q9NYY3 685 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 NCDNQ9UBB6 729 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 AJAP1Q9UKB5 411 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 K7EQS6 105 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 FOXN3O00409 490 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 CAPN9O14815 690 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 HOXC11O43248 304 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 SART1O43290 800 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 MSI1O43347 362 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 GREM1O60565 184 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 GABBR2O75899 941 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 KLF8O95600 359 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 KLKB1P03952 638 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 CYBBP04839 570 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 NCAM1P13591 858 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 KRT9P35527 623 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 CHKAP35790 457 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 GPD2P43304 727 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 MYL5Q02045 173 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 TYRO3Q06418 890 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 MESP2Q0VG99 397 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 DMC1Q14565 340 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 DRAP1Q14919 205 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 CAVIN1Q6NZI2 390 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 Q6ZNB5 142 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 BHLHA9Q7RTU4 235 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 LONP2Q86WA8 852 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 SFTPA1Q8IWL2 248 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 SCML4Q8N228 414 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 ALLCQ8N6M5 410 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 USP33Q8TEY7 942 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 NELL1Q92832 810 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 NOX5Q96PH1 765 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 ZDHHC4Q9NPG8 344 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 TMEM63CQ9P1W3 806 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 AGO1Q9UL18 857 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 SMG5Q9UPR3 1016 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 HBS1LQ9Y450 684 aaKnown RBP11.14□□□□□ -0.63
SHMT2-213ENST00000554600 FHOD1Q9Y613 1164 aa11.14□□□□□ -0.63
SHMT2-213ENST00000554600 PLXND1Q9Y4D7 1925 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 ANTXRLA6NF34 631 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 E5RJQ4 531 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TRIM24O15164 1050 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TSPAN3O60637 253 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 LILRB5O75023 590 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TNFRSF4P43489 277 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 COPB1P53618 953 aaKnown RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 BPIFB4P59827 614 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 MRPS21P82921 87 aaKnown RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 KCNMA1Q12791 1236 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SRSF5Q13243 272 aaKnown RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 PDCLQ13371 301 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SIM2Q14190 667 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 MEA1Q16626 185 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 KLHDC7AQ5VTJ3 777 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 CDKAL1Q5VV42 579 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SYT13Q7L8C5 426 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SLC47A2Q86VL8 602 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 ETFBKMTQ8IXQ9 262 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 AOPEPQ8N6M6 819 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TERB1Q8NA31 727 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TXNDC5Q8NBS9 432 aaKnown RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 TSTD1Q8NFU3 115 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 DDI1Q8WTU0 396 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 NAT10Q9H0A0 1025 aaKnown RBP11.13□□□□□ -0.63
SHMT2-213ENST00000554600 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 MARK1Q9P0L2 795 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 CEP83Q9Y592 693 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
SHMT2-213ENST00000554600 FAM170AA1A519 330 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 AXIN1O15169 862 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 CACNG3O60359 315 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 APBB3O95704 486 aa11.12□□□□□ -0.63
SHMT2-213ENST00000554600 UCHL3P15374 230 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms