RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 LEFTY2O00292 366 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 AKR1B10O60218 316 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TDRD6O60522 2096 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 RNASEH1O60930 286 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 BEST1O76090 585 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ADH1CP00326 375 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 EGFP01133 1207 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TYRP14679 529 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PDGFRAP16234 1089 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PRLRP16471 622 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TNFAIP3P21580 790 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PTGER3P43115 390 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MAPK9P45984 424 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PSMD8P48556 350 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DGKGP49619 791 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 EPHB1P54762 984 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CLDN6P56747 220 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DYNLT1P63172 113 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ARHGAP29Q52LW3 1261 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 C19orf48Q6RUI8 117 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 VITQ6UXI7 678 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 C15orf39Q6ZRI6 1047 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 B4GALNT4Q76KP1 1039 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TMC6Q7Z403 805 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ERICH1Q86X53 443 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 UBALD2Q8IYN6 164 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 RBBP8NLQ8NC74 664 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 LSM14AQ8ND56 463 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 NEK11Q8NG66 645 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SPATA18Q8TC71 538 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 RHBDD1Q8TEB9 315 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CLEC4CQ8WTT0 213 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF707Q96C28 371 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DNAJC19Q96DA6 116 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SMARCD1Q96GM5 515 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SPACA7Q96KW9 195 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 NCAPGQ9BPX3 1015 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ELOVL4Q9GZR5 314 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 NIF3L1Q9GZT8 377 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 RNF38Q9H0F5 515 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ABCG8Q9H221 673 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ZWILCHQ9H900 591 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 KIAA1586Q9HCI6 787 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 POLMQ9NP87 494 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 LTB4R2Q9NPC1 389 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ZDHHC7Q9NXF8 308 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MPP6Q9NZW5 540 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PRDM4Q9UKN5 801 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SNX10Q9Y5X0 201 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SPTBP11277 2137 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SCN10AQ9Y5Y9 1956 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 UBE4BO95155 1302 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 hCG_2014768A0A024R1R8 64 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 KRIT1O00522 736 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MAN2B1O00754 1011 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TGFB1I1O43294 461 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PPP6R2O75170 966 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TULP3O75386 442 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 LYPLA2O95372 231 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MOCS3O95396 460 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CAVIN2O95810 425 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ASS1P00966 412 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DNTTP04053 509 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ADH5P11766 374 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SKILP12757 684 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 JUPP14923 745 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 POLR2EP19388 210 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GJA4P35212 333 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SLC11A2P49281 568 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF165P49910 485 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 PMS1P54277 932 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CACNA2D1P54289 1103 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 IRX4P78413 519 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GTF2BQ00403 316 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GFPT1Q06210 699 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DSC1Q08554 894 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MTA1Q13330 715 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 C1orf61Q13536 156 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GSE1Q14687 1217 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TAF5Q15542 800 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DPCR1Q3MIW9 517 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 ANO6Q4KMQ2 910 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CBWD6Q4V339 395 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CBWD3Q5JTY5 395 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CBWD5Q5RIA9 395 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 SYCP2LQ5T4T6 812 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 KAZNQ674X7 775 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TPGS2Q68CL5 300 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 DOK6Q6PKX4 331 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 LRRC31Q6UY01 552 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 GBP6Q6ZN66 633 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 MRPL10Q7Z7H8 261 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 JAMLQ86YT9 394 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 TRIML1Q8N9V2 468 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 KIAA0895Q8NCT3 520 aa2.62□□□□□ -1.99
PRPF39-205ENST00000554081 C1orf131Q8NDD1 294 aaKnown RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 USP13Q92995 863 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-205ENST00000554081 CELF6Q96J87 481 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms