RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 FMNL3Q8IVF7 1028 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 ZBTB44Q8NCP5 570 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 SHC3Q92529 594 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 BBS2Q9BXC9 721 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 FAM126AQ9BYI3 521 aaPredicted RBP24.69■■□□□ 1.54
TDP1-205ENST00000553527 SEMA4AQ9H3S1 761 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 ARHGEF4Q9NR80 690 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 ABCC13Q9NSE7 274 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 PIEZO1Q92508 2521 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 FOXN3O00409 490 aaPredicted RBP24.68■■□□□ 1.54
TDP1-205ENST00000553527 KAT7O95251 611 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 FANCCQ00597 558 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 UBXN1Q04323 297 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 RAPGEF1Q13905 1077 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 GOLGA1Q92805 767 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 NELL1Q92832 810 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 LSM14BQ9BX40 385 aaKnown RBP24.68■■□□□ 1.54
TDP1-205ENST00000553527 OLA1Q9NTK5 396 aaKnown RBP24.68■■□□□ 1.54
TDP1-205ENST00000553527 PLK2Q9NYY3 685 aa24.68■■□□□ 1.54
TDP1-205ENST00000553527 TBC1D3BA6NDS4 549 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 TULP3O75386 442 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 TYRP14679 529 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 PTK2Q05397 1052 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 EMC10Q5UCC4 262 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 Q6ZNB5 142 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 PASD1Q8IV76 773 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 CCDC33Q8N5R6 958 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 DEC1Q9P2X7 70 aa24.67■■□□□ 1.54
TDP1-205ENST00000553527 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 TRIM24O15164 1050 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 HOXC11O43248 304 aaPredicted RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 LTFP02788 710 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 TIE1P35590 1138 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 EIF2DP41214 584 aaKnown RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 GAS2L3Q86XJ1 694 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 SCML4Q8N228 414 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 IRGQQ8WZA9 623 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 HINFPQ9BQA5 517 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 DCLK3Q9C098 648 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 RBSNQ9H1K0 784 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 ZDHHC4Q9NPG8 344 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 RTN4Q9NQC3 1192 aaKnown RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 DNAJC17Q9NVM6 304 aaKnown RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 WDR35Q9P2L0 1181 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 CYTH4Q9UIA0 394 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 AGO1Q9UL18 857 aaKnown RBP24.66■■□□□ 1.54
TDP1-205ENST00000553527 ZNF510Q9Y2H8 683 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 FHOD1Q9Y613 1164 aa24.66■■□□□ 1.54
TDP1-205ENST00000553527 A0A1B0GTH6 734 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 MSI1O43347 362 aaKnown RBP24.65■■□□□ 1.54
TDP1-205ENST00000553527 FBXO21O94952 628 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 GRIA2P42262 883 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 ACADSBP45954 432 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 SRSF5Q13243 272 aaKnown RBP24.65■■□□□ 1.54
TDP1-205ENST00000553527 DRAP1Q14919 205 aaPredicted RBP24.65■■□□□ 1.54
TDP1-205ENST00000553527 KLHDC7AQ5VTJ3 777 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 DPY19L2P1Q6NXN4 242 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 SLC47A2Q86VL8 602 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 CCDC26Q8TAB7 109 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 USP33Q8TEY7 942 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 FAM149B1Q96BN6 582 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 PCMTD1Q96MG8 357 aaPredicted RBP24.65■■□□□ 1.54
TDP1-205ENST00000553527 XPO6Q96QU8 1125 aaKnown RBP24.65■■□□□ 1.54
TDP1-205ENST00000553527 HHIPQ96QV1 700 aa24.65■■□□□ 1.54
TDP1-205ENST00000553527 LILRB5O75023 590 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 PAPSS2O95340 614 aaPredicted RBP24.64■■□□□ 1.54
TDP1-205ENST00000553527 NCAM1P13591 858 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 CLCN1P35523 988 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 KRT9P35527 623 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 CHKAP35790 457 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 HARS2P49590 506 aaKnown RBP24.64■■□□□ 1.54
TDP1-205ENST00000553527 UBASH3AP57075 661 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 DMC1Q14565 340 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 SYCP1Q15431 976 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 LPAL2Q16609 132 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 LONP2Q86WA8 852 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 ETFBKMTQ8IXQ9 262 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 PLD4Q96BZ4 506 aa24.64■■□□□ 1.54
TDP1-205ENST00000553527 NAP1L5Q96NT1 182 aaPredicted RBP24.64■■□□□ 1.54
TDP1-205ENST00000553527 PTPRZ1P23471 2315 aaPredicted RBP24.63■■□□□ 1.53
TDP1-205ENST00000553527 E5RJQ4 531 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 KLK7P49862 253 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 GRAMD4Q6IC98 578 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 PRR23BQ6ZRT6 265 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 SYT13Q7L8C5 426 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 PHTF2Q8N3S3 785 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 WDTC1Q8N5D0 677 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 ALLCQ8N6M5 410 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 ACDQ96AP0 544 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 ERGIC2Q96RQ1 377 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 SLC4A5Q9BY07 1137 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 PDCL3Q9H2J4 239 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 PLCB1Q9NQ66 1216 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 IFNKQ9P0W0 207 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 TJP2Q9UDY2 1190 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 NAALADL1Q9UQQ1 740 aa24.63■■□□□ 1.53
TDP1-205ENST00000553527 HBS1LQ9Y450 684 aaKnown RBP24.63■■□□□ 1.53
TDP1-205ENST00000553527 FAM170AA1A519 330 aa24.62■■□□□ 1.53
TDP1-205ENST00000553527 TEX33O43247 280 aa24.62■■□□□ 1.53
TDP1-205ENST00000553527 HRO43593 1189 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms