RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
PRKCH-204ENST00000553265 THEGQ9P2T0 379 aa6.97□□□□□ -1.29
PRKCH-204ENST00000553265 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
PRKCH-204ENST00000553265 MUC6Q6W4X9 2439 aa6.97□□□□□ -1.29
PRKCH-204ENST00000553265 TRIOO75962 3097 aa6.96□□□□□ -1.29
PRKCH-204ENST00000553265 GPAA1O43292 621 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 RPLP2P05387 115 aaKnown RBP6.96□□□□□ -1.3
PRKCH-204ENST00000553265 CASP2P42575 452 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 HK3P52790 923 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 BEX3Q00994 111 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 SP140Q13342 867 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 TMEM63BQ5T3F8 832 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 ANKS6Q68DC2 871 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 SWSAP1Q6NVH7 229 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 CXCL17Q6UXB2 119 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 PDZD4Q76G19 769 aaPredicted RBP6.96□□□□□ -1.3
PRKCH-204ENST00000553265 TLK2Q86UE8 772 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 CPXCR1Q8N123 301 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 PCSK9Q8NBP7 692 aaKnown RBP6.96□□□□□ -1.3
PRKCH-204ENST00000553265 CHST13Q8NET6 341 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 SLC35B2Q8TB61 432 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 ZCCHC4Q9H5U6 513 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 FAM204AQ9H8W3 233 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 SEC61A2Q9H9S3 476 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 LMBRD1Q9NUN5 540 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 MTMR4Q9NYA4 1195 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 FBXO40Q9UH90 709 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 FEM1BQ9UK73 627 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 PCDHGB6Q9Y5F9 930 aa6.96□□□□□ -1.3
PRKCH-204ENST00000553265 TET1Q8NFU7 2136 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TCF20Q9UGU0 1960 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 FAM227AF5H4B4 570 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 H3BUI4 141 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CLGNO14967 610 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 DHX16O60231 1041 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TTLL1O95922 423 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 MALP21145 153 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 RAP2BP61225 183 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 RAB1AP62820 205 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 MRPL49Q13405 166 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 RAB39AQ14964 217 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 RAB30Q15771 203 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 COBLL1Q53SF7 1204 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 C10orf62Q5T681 223 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 THEMIS2Q5TEJ8 643 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 SLFN13Q68D06 897 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ZSCAN25Q6NSZ9 544 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CHST15Q7LFX5 561 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 DAAM2Q86T65 1068 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 FBXO16Q8IX29 292 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ANKRD35Q8N283 1001 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TMEM199Q8N511 208 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CELF5Q8N6W0 485 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CCDC89Q8N998 374 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ATXN2LQ8WWM7 1075 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CASKIN2Q8WXE0 1202 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 SLC35A4Q96G79 324 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ASB2Q96Q27 587 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TSPAN18Q96SJ8 248 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 XYLT2Q9H1B5 865 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 TMEM60Q9H2L4 133 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 HIPK3Q9H422 1215 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ACAD9Q9H845 621 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CHST12Q9NRB3 414 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 ECHDC1Q9NTX5 307 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 RNF146Q9NTX7 359 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 PPP4R1LQ9P1A2 415 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 CLIP2Q9UDT6 1046 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 NOL7Q9UMY1 257 aaKnown RBP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.95□□□□□ -1.3
PRKCH-204ENST00000553265 C5orf42Q9H799 3197 aa6.95□□□□□ -1.3
PRKCH-204ENST00000553265 EPOPA6NHQ4 379 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CXorf49A8MYA2 514 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-204ENST00000553265 SLC16A6O15403 523 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 RNF113AO15541 343 aaKnown RBP6.94□□□□□ -1.3
PRKCH-204ENST00000553265 ZBED4O75132 1171 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CD1AP06126 327 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 SBK3P0C264 359 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 MYOGP15173 224 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 RHCEP18577 417 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 TDO2P48775 406 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 STAT2P52630 851 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 RABGGTBP53611 331 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 PDE1AP54750 535 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CTXN1P60606 82 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 PSMC6P62333 389 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 RHDQ02161 417 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 TNFAIP2Q03169 654 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 SURF1Q15526 300 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CCDC96Q2M329 555 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 TAPT1Q6NXT6 567 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 FAM111BQ6SJ93 734 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 CCDC129Q6ZRS4 1044 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 LIMS2Q7Z4I7 341 aa6.94□□□□□ -1.3
PRKCH-204ENST00000553265 MYRIPQ8NFW9 859 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms