RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 AMPD1P23109 780 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 GBP1P32455 592 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 GJA8P48165 433 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 GBE1Q04446 702 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 SLC10A2Q12908 348 aaPredicted RBP20.47■□□□□ 0.87
SSH1-209ENST00000551165 TFDP2Q14188 446 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 TTMPQ5BVD1 217 aa20.47■□□□□ 0.87
SSH1-209ENST00000551165 MTRF1LQ9UGC7 380 aaKnown RBP20.47■□□□□ 0.87
SSH1-209ENST00000551165 FAM72CH0Y354 149 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 APOL1O14791 398 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 FAM72AQ5TYM5 149 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 FAM72DQ6L9T8 149 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 FAM117BQ6P1L5 589 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 FAM72BQ86X60 149 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 UHMK1Q8TAS1 419 aaKnown RBP20.46■□□□□ 0.87
SSH1-209ENST00000551165 CRISPLD1Q9H336 500 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 DDIT4Q9NX09 232 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 PATJQ8NI35 1801 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 SHBGP04278 402 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 CLTBP09497 229 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 HSPA8P11142 646 aaKnown RBP20.46■□□□□ 0.87
SSH1-209ENST00000551165 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 NUDT5Q9UKK9 219 aa20.46■□□□□ 0.87
SSH1-209ENST00000551165 MCF2LO15068 1137 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 CEP85LQ5SZL2 805 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 HIBCHQ6NVY1 386 aaPredicted RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 DARS2Q6PI48 645 aaKnown RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 PRSS55Q6UWB4 352 aaPredicted RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 RUFY1Q96T51 708 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 SLC27A5Q9Y2P5 690 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 SNX10Q9Y5X0 201 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 SF3B1O75533 1304 aaKnown RBP eCLIP20.45■□□□□ 0.862e-6■■■■■ 146.5
SSH1-209ENST00000551165 COL4A6Q14031 1691 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 TRIM43BA6NCK2 446 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 HOXA2O43364 376 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 VNN2O95498 520 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 RPL22P35268 128 aaKnown RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 GAD2Q05329 585 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 ZNF844Q08AG5 666 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 IKBKEQ14164 716 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 SCD5Q86SK9 330 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 TAC4Q86UU9 113 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 RSAD2Q8WXG1 361 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 TRIM43Q96BQ3 446 aaPredicted RBP20.45■□□□□ 0.86
SSH1-209ENST00000551165 NMUR1Q9HB89 426 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 PCDH9Q9HC56 1237 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 PNPLA8Q9NP80 782 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 NR2E3Q9Y5X4 410 aa20.45■□□□□ 0.86
SSH1-209ENST00000551165 H7C0C1 242 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 DNALI1O14645 258 aaPredicted RBP20.44■□□□□ 0.86
SSH1-209ENST00000551165 DGKIO75912 1065 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 ATP5OP48047 213 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 LBX1P52954 281 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 USP46P62068 366 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 KCTD16Q68DU8 428 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 VN1R3Q9BXE9 311 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 MRPL9Q9BYD2 267 aaKnown RBP20.44■□□□□ 0.86
SSH1-209ENST00000551165 FRMD8P1Q9BZ68 369 aaPredicted RBP20.44■□□□□ 0.86
SSH1-209ENST00000551165 PABPC3Q9H361 631 aaKnown RBP20.44■□□□□ 0.86
SSH1-209ENST00000551165 C11orf49Q9H6J7 331 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 CWH43Q9H720 699 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 FAM204AQ9H8W3 233 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 PRDM5Q9NQX1 630 aaPredicted RBP20.44■□□□□ 0.86
SSH1-209ENST00000551165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.44■□□□□ 0.86
SSH1-209ENST00000551165 CREB3O43889 395 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 CSF2RAP15509 400 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 ADRA1BP35368 520 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 DEFB103AP81534 67 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 SLC29A2Q14542 456 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 NCBP2-AS2Q69YL0 99 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 CNKSR3Q6P9H4 555 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 LRRC43Q8N309 656 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 IRGQQ8WZA9 623 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 USP29Q9HBJ7 922 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 OSER1Q9NX31 292 aa20.44■□□□□ 0.86
SSH1-209ENST00000551165 ADAM12O43184 909 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 PARNO95453 639 aaKnown RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 YWHAGP61981 247 aaKnown RBP eCLIP20.43■□□□□ 0.86
SSH1-209ENST00000551165 ROR1Q01973 937 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 MTMR3Q13615 1198 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 ZNF280DQ6N043 979 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 RNF19BQ6ZMZ0 732 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 VSIG1Q86XK7 387 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 SH2D3CQ8N5H7 860 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 DQX1Q8TE96 717 aaKnown RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 ARHGEF4Q9NR80 690 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 FBXW11Q9UKB1 542 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 COL4A4P53420 1690 aaPredicted RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 RARGP13631 454 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 TGM2P21980 687 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 RBL1P28749 1068 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 RNASEH2BQ5TBB1 312 aaKnown RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 ANKRD22Q5VYY1 191 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 RNF139Q8WU17 664 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 TMEM175Q9BSA9 504 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 CDC42EP4Q9H3Q1 356 aaKnown RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 SFMBT1Q9UHJ3 866 aa20.43■□□□□ 0.86
SSH1-209ENST00000551165 TPX2Q9ULW0 747 aaKnown RBP20.43■□□□□ 0.86
SSH1-209ENST00000551165 PCDHB5Q9Y5E4 795 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms