RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-207ENST00000550863 ADIGQ0VDE8 80 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 USP39Q53GS9 565 aaKnown RBP12.04□□□□□ -0.48
CPNE8-207ENST00000550863 RAB41Q5JT25 222 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 EOGTQ5NDL2 527 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 N4BP2L1Q5TBK1 243 aaPredicted RBP12.04□□□□□ -0.48
CPNE8-207ENST00000550863 RNF43Q68DV7 783 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 ARHGAP17Q68EM7 881 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 PSAPL1Q6NUJ1 521 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 ARHGEF19Q8IW93 802 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 KIAA1958Q8N8K9 716 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 CCDC150Q8NCX0 1101 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 OR2I1PQ8NGU4 316 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 CLEC4CQ8WTT0 213 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 SORCS1Q8WY21 1168 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 TFAP2BQ92481 460 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 EDEM1Q92611 657 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 PIGKQ92643 395 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 SMARCE1Q969G3 411 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 DUSP9Q99956 384 aaKnown RBP12.04□□□□□ -0.48
CPNE8-207ENST00000550863 PNPLA8Q9NP80 782 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 MARK1Q9P0L2 795 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 DNMT3LQ9UJW3 386 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
CPNE8-207ENST00000550863 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 CTNND2Q9UQB3 1225 aa12.04□□□□□ -0.48
CPNE8-207ENST00000550863 SLC12A8A0AV02 714 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 CD19P15391 556 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 ITPKAP23677 461 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 BRD2P25440 801 aaKnown RBP12.03□□□□□ -0.48
CPNE8-207ENST00000550863 TNFRSF4P43489 277 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 DGKGP49619 791 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 RGS7P49802 495 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 SGSHP51688 502 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 LIMK1P53667 647 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 STX17P56962 302 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 YWHAGP61981 247 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPNE8-207ENST00000550863 IRX4P78413 519 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 FYB2Q5VWT5 728 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 DENND1CQ8IV53 801 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 TSG101Q99816 390 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 POLMQ9NP87 494 aaPredicted RBP12.03□□□□□ -0.48
CPNE8-207ENST00000550863 SFMBT1Q9UHJ3 866 aa12.03□□□□□ -0.48
CPNE8-207ENST00000550863 AGO1Q9UL18 857 aaKnown RBP12.03□□□□□ -0.48
CPNE8-207ENST00000550863 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 GOLGA6L4A6NEF3 574 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 YJEFN3A6XGL0 299 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 E7ENQ6 273 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 O00370 1275 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 TSPAN3O60637 253 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 KRT37O76014 449 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 TOP3BO95985 862 aaKnown RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 PENKP01210 267 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 SPINK2P20155 84 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 NTSR1P30989 418 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 MAPK8P45983 427 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 FMO5P49326 533 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 MFAP3P55082 362 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 ENPEPQ07075 957 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 TRIM61Q5EBN2 209 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 TMEM215Q68D42 235 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 RSRC2Q7L4I2 434 aaKnown RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 SLC41A1Q8IVJ1 513 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 GSDMAQ96QA5 445 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 RMND1Q9NWS8 449 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 ARMCX3Q9UH62 379 aaPredicted RBP12.02□□□□□ -0.49
CPNE8-207ENST00000550863 COQ4Q9Y3A0 265 aa12.02□□□□□ -0.49
CPNE8-207ENST00000550863 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 KCNK5O95279 499 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 ZBED1O96006 694 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 RALAP11233 206 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 LCP1P13796 627 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 IL12RB1P42701 662 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 PLA2G4AP47712 749 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 BCAT1P54687 386 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 FKBP3Q00688 224 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 APBA1Q02410 837 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 RPL6Q02878 288 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 GOLGA8FQ08AF8 430 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 GOLGA8DPQ0D2H9 430 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 BST2Q10589 180 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 UAP1L1Q3KQV9 507 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 SGO2Q562F6 1265 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 LYSMD4Q5XG99 296 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 TTI2Q6NXR4 508 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 KLHDC10Q6PID8 442 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 TMEM270Q6UE05 265 aa12.01□□□□□ -0.49
CPNE8-207ENST00000550863 KIAA1324Q6UXG2 1013 aaKnown RBP12.01□□□□□ -0.49
CPNE8-207ENST00000550863 RRAGAQ7L523 313 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms