RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 FAM72DQ6L9T8 149 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 LVRNQ6Q4G3 990 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TBC1D1Q86TI0 1168 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FAM72BQ86X60 149 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 ATP11CQ8NB49 1132 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 KIAA1257Q9ULG3 409 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 MBLAC1A4D2B0 266 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FOXN2P32314 431 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 ERFP50548 548 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 RNASELQ05823 741 aaKnown RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FAAP100Q0VG06 881 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 NOMO1Q15155 1222 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TIGD5Q53EQ6 642 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 USP6NLQ92738 828 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 KATNAL1Q9BW62 490 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 CRTAC1Q9NQ79 661 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 ANK1P16157 1881 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 FAM47DPA6NHR8 397 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 MT-ND3P03897 115 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 HTRA3P83110 453 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TRMT10BQ6PF06 316 aaKnown RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 WDR83Q9BRX9 315 aaKnown RBP13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 SLC17A7Q9P2U7 560 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 TRIM33Q9UPN9 1127 aa13.19□□□□□ -0.3
SCAF11-209ENST00000547018 ALOX15BO15296 676 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 MGEA5O60502 916 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 AMHP03971 560 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 NPR3P17342 541 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 PCK1P35558 622 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 MAGEA9P43362 315 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 GABRB2P47870 512 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 CLEC20AQ6ZU45 233 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 IQCGQ9H095 443 aaKnown RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 KLC2Q9H0B6 622 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 PIGVQ9NUD9 493 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 SLC45A1Q9Y2W3 748 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 CXorf49A8MYA2 514 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 MFSD11O43934 449 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 KITP10721 976 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 L1CAMP32004 1257 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 PHBP35232 272 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 PTK7Q13308 1070 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 AGMOQ6ZNB7 445 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 NAT8LQ8N9F0 302 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 FAM111AQ96PZ2 611 aa13.18□□□□□ -0.3
SCAF11-209ENST00000547018 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
SCAF11-209ENST00000547018 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 ATP9BO43861 1147 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PYGBP11216 843 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 TPH1P17752 444 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 GCAP28676 217 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PGGT1BP53609 377 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 GEMIN4P57678 1058 aaKnown RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 LRRC8CQ8TDW0 803 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PPM1EQ8WY54 764 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 NSRP1Q9H0G5 558 aaKnown RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 ABI2Q9NYB9 513 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 MSI1O43347 362 aaKnown RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 SOAT2O75908 522 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 HMBSP08397 361 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 IL9RQ01113 521 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 STILQ15468 1287 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 TRABD2AQ86V40 505 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 TCP10LQ8TDR4 215 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 USP29Q9HBJ7 922 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 UBN1Q9NPG3 1134 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 KLHL8Q9P2G9 620 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 PSMC3IPQ9P2W1 217 aaPredicted RBP13.17□□□□□ -0.3
SCAF11-209ENST00000547018 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 CEP290O15078 2479 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 TRIM49D1C9J1S8 452 aa13.17□□□□□ -0.3
SCAF11-209ENST00000547018 EEF2KO00418 725 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms