RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ANKRD45Q5TZF3 282 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 NOTUMQ6P988 496 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 PDZD4Q76G19 769 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 ZNF771Q7L3S4 317 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 RALYLQ86SE5 291 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 CAMKK1Q8N5S9 505 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 OR2I1PQ8NGU4 316 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 NCOA7Q8NI08 942 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 PRPF31Q8WWY3 499 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 ADAMTS14Q8WXS8 1223 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SLC5A5Q92911 643 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TMEM143Q96AN5 459 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 CCDC51Q96ER9 411 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 POLR3CQ9BUI4 534 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TPSD1Q9BZJ3 242 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 LNPKQ9C0E8 428 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SLC32A1Q9H598 525 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 DHX33Q9H6R0 707 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TMEM74BQ9NUR3 256 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 EBF1Q9UH73 591 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 TCEAL9Q9UHQ7 104 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 MBD1Q9UIS9 605 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 PCDHB10Q9UN67 800 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SLC8A2Q9UPR5 921 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 BACE2Q9Y5Z0 518 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 SPTAN1Q13813 2472 aaKnown RBP7.21□□□□□ -1.26
CCDC60-205ENST00000546345 KNL1Q8NG31 2342 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 MYO9AB2RTY4 2548 aa7.21□□□□□ -1.26
CCDC60-205ENST00000546345 MYH11P35749 1972 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 SCN1AP35498 2009 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ANTXRLA6NF34 631 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 SMCO2A6NFE2 343 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 J3QKU1 62 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ARHGAP6O43182 974 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CCP110O43303 1012 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ERLIN2O94905 339 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 NPTXRO95502 500 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 FTH1P19P0C7X4 201 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 SRGAP2CP0DJJ0 459 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CALM1P0DP23 149 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CALM2P0DP24 149 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CALM3P0DP25 149 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 MYL4P12829 197 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CD59P13987 128 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 SFNP31947 248 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 DNM2P50570 870 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 IRAK1P51617 712 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TUBB4BP68371 445 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 EGR3Q06889 387 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 GPS2Q13227 327 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TCEAL1Q15170 157 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 XP32Q5T750 250 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 PDXDC1Q6P996 788 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 FERMT3Q86UX7 667 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 MICU3Q86XE3 530 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 MARCH9Q86YJ5 346 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TCEAL8Q8IYN2 117 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ZNF655Q8N720 491 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-205ENST00000546345 PNPLA1Q8N8W4 532 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 RNF149Q8NC42 400 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ZNF397Q8NF99 534 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ZNF461Q8TAF7 563 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 PSPC1Q8WXF1 523 aaKnown RBP7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TCTN2Q96GX1 697 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 CAMK1GQ96NX5 476 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TMEM209Q96SK2 561 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 HDAC8Q9BY41 377 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 HPS4Q9NQG7 708 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 PRDM7Q9NQW5 492 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 XPNPEP1Q9NQW7 623 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 TMEM51Q9NW97 253 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 GFOD1Q9NXC2 390 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 BARHL2Q9NY43 387 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 FAM53CQ9NYF3 392 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ACTR10Q9NZ32 417 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 PRR13Q9NZ81 148 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ADGRE2Q9UHX3 823 aa7.2□□□□□ -1.26
CCDC60-205ENST00000546345 UBR5O95071 2799 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-205ENST00000546345 ANKRD17O75179 2603 aaKnown RBP7.19□□□□□ -1.26
CCDC60-205ENST00000546345 PRRG1O14668 218 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 ZNF197O14709 1029 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 PRC1O43663 620 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 NRDCO43847 1150 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 GAS7O60861 476 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 PRAMEF1O95521 474 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 APBB3O95704 486 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
CCDC60-205ENST00000546345 HNRNPLP14866 589 aaKnown RBP eCLIP7.19□□□□□ -1.26
CCDC60-205ENST00000546345 ATF2P15336 505 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 AXLP30530 894 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 PTGER3P43115 390 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 BRCC3P46736 316 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 PTENP60484 403 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 CBX1P83916 185 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 ELAVL2Q12926 359 aaKnown RBP7.19□□□□□ -1.26
CCDC60-205ENST00000546345 CAPSQ13938 189 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 DMC1Q14565 340 aa7.19□□□□□ -1.26
CCDC60-205ENST00000546345 EMC2Q15006 297 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms