RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MARVELD2Q8N4S9 558 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 GSDMBQ8TAX9 411 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 PPP4R1Q8TF05 950 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 LRRC39Q96DD0 335 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 MMP19Q99542 508 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 MTMR12Q9C0I1 747 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 SDCBP2Q9H190 292 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 HMX2A2RU54 273 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 FAM159BA6NKW6 160 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 VILLO15195 856 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 PMLP29590 882 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 ALDH1A3P47895 512 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 C16orf46Q6P387 395 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 TRMT10BQ6PF06 316 aaKnown RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 WDR49Q8IV35 697 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 DCUN1D1Q96GG9 259 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 DNAJC1Q96KC8 554 aaKnown RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 IFT122Q9HBG6 1241 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.68□□□□□ -0.06
SRP54-202ENST00000546080 DNAAF2Q9NVR5 837 aaKnown RBP14.68□□□□□ -0.06
SRP54-202ENST00000546080 DNAJC28Q9NX36 388 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 CYTH4Q9UIA0 394 aa14.68□□□□□ -0.06
SRP54-202ENST00000546080 H3BNX3 289 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 PFDN1O60925 122 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 FGF3P11487 239 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 MYL4P12829 197 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 NCF2P19878 526 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 CCND2P30279 289 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 NAMPTP43490 491 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 SNAPC2Q13487 334 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TRPC3Q13507 836 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TLR1Q15399 786 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 KBTBD6Q86V97 674 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 XYLT1Q86Y38 959 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 BRSK2Q8IWQ3 736 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 EFCAB3Q8N7B9 438 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 KLHL23Q8NBE8 558 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 FAM151AQ8WW52 585 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 KCNK16Q96T55 309 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 USP29Q9HBJ7 922 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 GMEB1Q9Y692 573 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 ADGRA2Q96PE1 1338 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 ZNF646O15015 1829 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 MED7O43513 233 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 DENRO43583 198 aaKnown RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 ITGBL1O95965 494 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 ZBED1O96006 694 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TFAP2AP05549 437 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 RBL1P28749 1068 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 IDH3AP50213 366 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 PEX6Q13608 980 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 HSP90AA5PQ58FG0 334 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 KLHDC10Q6PID8 442 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TIFABQ6ZNK6 161 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TRIM74Q86UV6 250 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TRIM73Q86UV7 250 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 GPRASP2Q96D09 838 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 ZFRQ96KR1 1074 aaKnown RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 PEBP4Q96S96 227 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 CPXM1Q96SM3 734 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TRIM56Q9BRZ2 755 aaKnown RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 ZNF341Q9BYN7 854 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 MRPS26Q9BYN8 205 aaKnown RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 LHX5Q9H2C1 402 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 QTRT2Q9H974 415 aaKnown RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 ASNSD1Q9NWL6 643 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 C6orf203Q9P0P8 240 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 HSFX1Q9UBD0 423 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 CIDEBQ9UHD4 219 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 LZTS1Q9Y250 596 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 TELO2Q9Y4R8 837 aa14.67□□□□□ -0.06
SRP54-202ENST00000546080 CTDP1Q9Y5B0 961 aaPredicted RBP14.67□□□□□ -0.06
SRP54-202ENST00000546080 LOC100653049A0A140TA62 436 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 STRNO43815 780 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 ADCY3O60266 1144 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 GLRA3O75311 464 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 KRT34O76011 436 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 ATG7O95352 703 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 ERBB2P04626 1255 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 SERPINE1P05121 402 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 EDN1P05305 212 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 KCNA4P22459 653 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 CNTFP26441 200 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 TNFSF9P41273 254 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 HPCAP84074 193 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 ACAP1Q15027 740 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 CNGA3Q16281 694 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 ZNF699Q32M78 642 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 NADK2Q4G0N4 442 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 STXBP5Q5T5C0 1151 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 N4BP2L1Q5TBK1 243 aaPredicted RBP14.66□□□□□ -0.06
SRP54-202ENST00000546080 KLC3Q6P597 504 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 POTEAQ6S8J7 498 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 FRMD7Q6ZUT3 714 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 MAVSQ7Z434 540 aa14.66□□□□□ -0.06
SRP54-202ENST00000546080 PQLC1Q8N2U9 271 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms