RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	DPY19L2P1	Q6NXN4	242 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	SFTPA1	Q8IWL2	248 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	DCLK2	Q8N568	766 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	ZNF606	Q8WXB4	792 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	NDRG1	Q92597	394 aa	Known RBP	14.02	□□□□□ -0.17
POLE-222	ENST00000545015	HHIP	Q96QV1	700 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	CRACR2A	Q9BSW2	395 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	BBS2	Q9BXC9	721 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	SLC4A5	Q9BY07	1137 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	IRX2	Q9BZI1	471 aa	Predicted RBP	14.02	□□□□□ -0.17
POLE-222	ENST00000545015	NDST4	Q9H3R1	872 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	SIX2	Q9NPC8	291 aa		14.02	□□□□□ -0.17
POLE-222	ENST00000545015	DNAJC17	Q9NVM6	304 aa	Known RBP	14.02	□□□□□ -0.17
POLE-222	ENST00000545015	POLR3B	Q9NW08	1133 aa	Predicted RBP	14.02	□□□□□ -0.17
POLE-222	ENST00000545015	TBC1D3B	A6NDS4	549 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	ANTXRL	A6NF34	631 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	NEDD8-MDP1	E9PL57	170 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	SART1	O43290	800 aa	Known RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	IGLV3-27	P01718	113 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	KRT5	P13647	590 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	PXN	P49023	591 aa	Predicted RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	RGS7	P49802	495 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	SEC13	P55735	322 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	ZNF445	P59923	1031 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	KDSR	Q06136	332 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	SRSF5	Q13243	272 aa	Known RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	VWA3B	Q502W6	1294 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TPGS1	Q6ZTW0	290 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	CACNA2D4	Q7Z3S7	1137 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TRMT11	Q7Z4G4	463 aa	Known RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TMEM110	Q86TL2	294 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	ALLC	Q8N6M5	410 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	NAT16	Q8N8M0	369 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TXNDC5	Q8NBS9	432 aa	Known RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TSTD1	Q8NFU3	115 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	ENOX1	Q8TC92	643 aa	Known RBP	14.01	□□□□□ -0.17
POLE-222	ENST00000545015	GPT2	Q8TD30	523 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	RNF139	Q8WU17	664 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	P2RY11	Q96G91	374 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	TUBGCP2	Q9BSJ2	902 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	HCN2	Q9UL51	889 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	PCDHGC3	Q9UN70	934 aa		14.01	□□□□□ -0.17
POLE-222	ENST00000545015	SGK1	O00141	431 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	ADAM23	O75077	832 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	KLF8	O95600	359 aa	Predicted RBP	14	□□□□□ -0.17
POLE-222	ENST00000545015	CALCA	P01258	141 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	LTF	P02788	710 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	LCP1	P13796	627 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	HNRNPL	P14866	589 aa	Known RBP eCLIP	14	□□□□□ -0.17
POLE-222	ENST00000545015	EEF1G	P26641	437 aa	Known RBP	14	□□□□□ -0.17
POLE-222	ENST00000545015	GNA15	P30679	374 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	TIE1	P35590	1138 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	RING1	Q06587	406 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	NNT	Q13423	1086 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	C10orf76	Q5T2E6	689 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	EMC10	Q5UCC4	262 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	RNF43	Q68DV7	783 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	DENND1B	Q6P3S1	775 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	GJB7	Q6PEY0	223 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	TMEM92	Q6UXU6	159 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	PRR23B	Q6ZRT6	265 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	CEP68	Q76N32	757 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	C11orf74	Q86VG3	221 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	FMNL3	Q8IVF7	1028 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	KIAA2013	Q8IYS2	634 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	FAM160A2	Q8N612	972 aa	Predicted RBP	14	□□□□□ -0.17
POLE-222	ENST00000545015	OLIG1	Q8TAK6	271 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	AZIN2	Q96A70	460 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	HINFP	Q9BQA5	517 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	SLC2A11	Q9BYW1	496 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	MYOF	Q9NZM1	2061 aa		14	□□□□□ -0.17
POLE-222	ENST00000545015	PRRT4	C9JH25	899 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	GOLGA6L22	H0YM25	854 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	TRIM24	O15164	1050 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	FOXD2	O60548	495 aa	Predicted RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	ALDH1A2	O94788	518 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	LETM1	O95202	739 aa	Predicted RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	FYN	P06241	537 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	HMBS	P08397	361 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	HARS2	P49590	506 aa	Known RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	DGKG	P49619	791 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	CREBRF	Q8IUR6	639 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	DENND1C	Q8IV53	801 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	CCDC33	Q8N5R6	958 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	EDEM1	Q92611	657 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	TRIM62	Q9BVG3	475 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	LHX5	Q9H2C1	402 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	CD248	Q9HCU0	757 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	POLM	Q9NP87	494 aa	Predicted RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	PARD6A	Q9NPB6	346 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	SAMSN1	Q9NSI8	373 aa	Known RBP	13.99	□□□□□ -0.17
POLE-222	ENST00000545015	SFMBT1	Q9UHJ3	866 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	CYTH4	Q9UIA0	394 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	PCDHGA5	Q9Y5G8	931 aa		13.99	□□□□□ -0.17
POLE-222	ENST00000545015	PRR5-ARHGAP8	B1AHC4	643 aa		13.98	□□□□□ -0.17
POLE-222	ENST00000545015	KCNJ18	B7U540	433 aa		13.98	□□□□□ -0.17
POLE-222	ENST00000545015	NPC1	O15118	1278 aa		13.98	□□□□□ -0.17
POLE-222	ENST00000545015	THAP12	O43422	761 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms