RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 RAD54BQ9Y620 910 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 ALG6Q9Y672 507 aa20.58■□□□□ 0.89
BPTF-208ENST00000544778 TBKBP1A7MCY6 615 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 UBASH3BQ8TF42 649 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 RAD21L1Q9H4I0 556 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 VCPKMTQ9H867 229 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 ANKRD13AQ8IZ07 590 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 GPAMQ9HCL2 828 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 DSEQ9UL01 958 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 PHF21BQ96EK2 531 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 ZMYM5Q9UJ78 669 aa20.58■□□□□ 0.88
BPTF-208ENST00000544778 CDC73Q6P1J9 531 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 DSG4Q86SJ6 1040 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 NSUN4Q96CB9 384 aaKnown RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 SEPHS2Q99611 448 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 MYL12AP19105 171 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 LPCAT1Q8NF37 534 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 ELL3Q9HB65 397 aaPredicted RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 MEI4A8MW99 385 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 SEMA3FQ13275 785 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 TSNQ15631 228 aaKnown RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 TAF2Q6P1X5 1199 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 SEMA4DQ92854 862 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 TIMM44O43615 452 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 PNMA5Q96PV4 448 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 SLC9A7Q96T83 725 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 GPATCH2LQ9NWQ4 482 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 MTA2O94776 668 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 ALX1Q15699 326 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 TFDP3Q5H9I0 405 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 ARMC4Q5T2S8 1044 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 SUGP1Q8IWZ8 645 aaKnown RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 GJD4Q96KN9 370 aaPredicted RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 SMAPO00193 183 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 NUP107P57740 925 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 ITGA9Q13797 1035 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 BNC2Q6ZN30 1099 aaPredicted RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 PEG10Q86TG7 708 aaKnown RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 FBXO36Q8NEA4 188 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 FAM172AQ8WUF8 416 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 IRX2Q9BZI1 471 aaPredicted RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 PHTF1Q9UMS5 762 aa20.57■□□□□ 0.88
BPTF-208ENST00000544778 MRPL42Q9Y6G3 142 aaKnown RBP20.57■□□□□ 0.88
BPTF-208ENST00000544778 CYP2C8P10632 490 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 C2CD6Q53TS8 623 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 TFAP2DQ7Z6R9 452 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 ZKSCAN4Q969J2 545 aaPredicted RBP20.56■□□□□ 0.88
BPTF-208ENST00000544778 TMEM159Q96B96 161 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 KLHL41O60662 606 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 LSP1P33241 339 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 HNMTP50135 292 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 DEFB129Q9H1M3 183 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 UBE2Q2LH0YL09 131 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 POMCP01189 267 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 MUTP22033 750 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 METTL16Q86W50 562 aaKnown RBP20.56■□□□□ 0.88
BPTF-208ENST00000544778 CDHR2Q9BYE9 1310 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 IGKV5-2P06315 115 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 ZNF286BP0CG31 522 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 RHAGQ02094 409 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 AGMOQ6ZNB7 445 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 COLGALT2Q8IYK4 626 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 TUBE1Q9UJT0 475 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 DRG1Q9Y295 367 aaKnown RBP20.56■□□□□ 0.88
BPTF-208ENST00000544778 CLUP10909 449 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 PDHBP11177 359 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 OSCP1Q8WVF1 389 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 ERP44Q9BS26 406 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 HAO1Q9UJM8 370 aa20.56■□□□□ 0.88
BPTF-208ENST00000544778 TMEM114B3SHH9 223 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 GNA13Q14344 377 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 TMC5Q6UXY8 1006 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.55■□□□□ 0.88
BPTF-208ENST00000544778 HS6ST1O60243 411 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 SGPL1O95470 568 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 VPS33AQ96AX1 596 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 SPG21Q9NZD8 308 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 PSTPIP1O43586 416 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 PLD1Q13393 1074 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 FBXO16Q8IX29 292 aaPredicted RBP20.55■□□□□ 0.88
BPTF-208ENST00000544778 EID3Q8N140 333 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 XRCC4Q13426 336 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 C11orf63Q6NUN7 778 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 LEMD2Q8NC56 503 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 DPY30Q9C005 99 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 ATXN3LQ9H3M9 355 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 LRRC40Q9H9A6 602 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 USP18Q9UMW8 372 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
BPTF-208ENST00000544778 CCT8L1PA6NM43 557 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 H3BMM5 538 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 MT-CO1P00395 513 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 SNRPFP62306 86 aaKnown RBP20.55■□□□□ 0.88
BPTF-208ENST00000544778 POU6F1Q14863 301 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 AGKQ53H12 422 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 TMC2Q8TDI7 906 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 DPF2Q92785 391 aa20.55■□□□□ 0.88
BPTF-208ENST00000544778 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms