RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 GATMP50440 423 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ADKP55263 362 aaKnown RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 RACK1P63244 317 aaKnown RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 TMEM63BQ5T3F8 832 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 RHOUQ7L0Q8 258 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF669Q96BR6 464 aaPredicted RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 SPATA16Q9BXB7 569 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 NYXQ9GZU5 481 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 TBC1D23Q9NUY8 699 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 MBD2Q9UBB5 411 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 PCDHB4Q9Y5E5 795 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 C5orf60A6NFR6 353 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 NOS1APO75052 506 aaPredicted RBP9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CASP1P29466 404 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CASP5P51878 434 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 EPHB1P54762 984 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 GNG2P59768 71 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 KCNJ10P78508 379 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 DUSP4Q13115 394 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 KCNJ8Q15842 424 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CNGA2Q16280 664 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 WDR73Q6P4I2 378 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 KCTD20Q7Z5Y7 419 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 CDH26Q8IXH8 852 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 BEST2Q8NFU1 509 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF285Q96NJ3 590 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 EPB41L5Q9HCM4 733 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 ZSCAN32Q9NX65 697 aa9.17□□□□□ -0.94
VPS13D-212ENST00000543766 A0A1W2PRG0 241 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SLC25A17O43808 307 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 TOM1O60784 492 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 FAM107AO95990 144 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ITGB3P05106 788 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 QDPRP09417 244 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CCNG1P51959 295 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF569Q5MCW4 686 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 MEI1Q5TIA1 1274 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 PAPD7Q5XG87 772 aaKnown RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 C16orf59Q7L2K0 433 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 DPPA2Q7Z7J5 298 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 P3H2Q8IVL5 708 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 GALNT12Q8IXK2 581 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 PRSS58Q8IYP2 241 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 RDM1Q8NG50 284 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 FBXO27Q8NI29 283 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 RRP36Q96EU6 259 aaKnown RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 MAPRE3Q9UPY8 281 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SLC22A14Q9Y267 594 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CRYL1Q9Y2S2 319 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 MRC1P22897 1456 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 MYH7P12883 1935 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 MTX2O75431 263 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 BMP6P22004 513 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 PTBP1P26599 531 aaKnown RBP eCLIP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 DRICH1Q6PGQ1 229 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 GPR142Q7Z601 462 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ITIH5Q86UX2 942 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SLC22A18Q96BI1 424 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CCT8L2Q96SF2 557 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ZNF275Q9NSD4 429 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 GIN1Q9NXP7 522 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 WWOXQ9NZC7 414 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 KIF17Q9P2E2 1029 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 KDM3BQ7LBC6 1761 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SRGAP2O75044 1071 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 UMPSP11172 480 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 TNFAIP2Q03169 654 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 PUDPQ08623 228 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 STRN3Q13033 797 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ERV3-1Q14264 604 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 GLE1Q53GS7 698 aaKnown RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 CDH24Q86UP0 819 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 FBXO15Q8NCQ5 510 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 SYTL5Q8TDW5 730 aaPredicted RBP9.16□□□□□ -0.94
VPS13D-212ENST00000543766 LPPQ93052 612 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 GRHPRQ9UBQ7 328 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 BCL9O00512 1426 aa9.16□□□□□ -0.94
VPS13D-212ENST00000543766 ADAMTS7Q9UKP4 1686 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 A0A1W2PQ72 361 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 TRPC5OSA6NMA1 111 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 GNB5O14775 395 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 PGLSO95336 258 aa9.15□□□□□ -0.94
VPS13D-212ENST00000543766 ASS1P00966 412 aaKnown RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 TCN1P20061 433 aaPredicted RBP9.15□□□□□ -0.94
VPS13D-212ENST00000543766 GRK3P35626 688 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms