RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 C16orf46Q6P387 395 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 DENND1BQ6P3S1 775 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 TRMT10BQ6PF06 316 aaKnown RBP12.96□□□□□ -0.33
SMCR5-201ENST00000543475 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 CAND1Q86VP6 1230 aaKnown RBP12.96□□□□□ -0.33
SMCR5-201ENST00000543475 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 DEPDC1BQ8WUY9 529 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
SMCR5-201ENST00000543475 CATSPER2Q96P56 530 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 RMDN3Q96TC7 470 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 KLC2Q9H0B6 622 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 CYP26B1Q9NR63 512 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 USP18Q9UMW8 372 aa12.96□□□□□ -0.33
SMCR5-201ENST00000543475 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 K7ERI5 159 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 ZMPSTE24O75844 475 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 CD19P15391 556 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 IDH3AP50213 366 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 SERPINB9P50453 376 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 CDH6P55285 790 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 RPS6P62753 249 aaKnown RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 CYLC2Q14093 348 aaPredicted RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 ACBD5Q5T8D3 534 aaPredicted RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 METTL25Q8N6Q8 603 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 RDM1Q8NG50 284 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 KCNK16Q96T55 309 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.34
SMCR5-201ENST00000543475 PDLIM7Q9NR12 457 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.34
SMCR5-201ENST00000543475 LY75O60449 1722 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 DNAJA2O60884 412 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 GABRB2P47870 512 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 MYL6P60660 151 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 YWHAEP62258 255 aaKnown RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 GSDMBQ8TAX9 411 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 TFB1MQ8WVM0 346 aaKnown RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 CNBD2Q96M20 576 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 NIF3L1Q9GZT8 377 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 PNPOQ9NVS9 261 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 C6orf203Q9P0P8 240 aaPredicted RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 APPL1Q9UKG1 709 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 ARHGAP26Q9UNA1 814 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 TNFAIP8O95379 198 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 FKBP1AP62942 108 aaKnown RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 DBN1Q16643 649 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 N4BP2L1Q5TBK1 243 aaPredicted RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 POTEAQ6S8J7 498 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 DEPTORQ8TB45 409 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 PLEKHG4BQ96PX9 1271 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 FAM96AQ9H5X1 160 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMCR5-201ENST00000543475 FBXO40Q9UH90 709 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 PSMD13Q9UNM6 376 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 DMTF1Q9Y222 760 aa12.95□□□□□ -0.34
SMCR5-201ENST00000543475 A0A0J9YVX5 310 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 ARHGAP10A1A4S6 786 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 FAM159BA6NKW6 160 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 DCXO43602 365 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 STBD1O95210 358 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 SRGAP2CP0DJJ0 459 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 SETSIPP0DME0 302 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 SRGAP2BP0DMP2 458 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 MYL4P12829 197 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 NPR1P16066 1061 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 MTTPP55157 894 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 PRKCEQ02156 737 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 TFDP2Q14188 446 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 FAM47CQ5HY64 1035 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 RARS2Q5T160 578 aaKnown RBP12.94□□□□□ -0.34
SMCR5-201ENST00000543475 VWA5B1Q5TIE3 1220 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 MAVSQ7Z434 540 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 ABTB1Q969K4 478 aaPredicted RBP12.94□□□□□ -0.34
SMCR5-201ENST00000543475 LRGUKQ96M69 825 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 MTMR12Q9C0I1 747 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 TIMMDC1Q9NPL8 285 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 DNAJC28Q9NX36 388 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 CYTH4Q9UIA0 394 aa12.94□□□□□ -0.34
SMCR5-201ENST00000543475 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms