RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PRKAA1Q13131 559 aa19.92■□□□□ 0.78
SUDS3-204ENST00000543473 ANO4Q32M45 955 aa19.92■□□□□ 0.78
SUDS3-204ENST00000543473 DPPA5A6NC42 116 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 IFNA8P32881 189 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 GP5P40197 560 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 ALDH1A3P47895 512 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 NME5P56597 212 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 RUNX1T1Q06455 604 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 ZNF268Q14587 947 aaPredicted RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 RNF220Q5VTB9 566 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 KYAT3Q6YP21 454 aaKnown RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 F8VP50 259 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 NDUFS3O75489 264 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 C21orf59P57076 290 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 CHRNB3Q05901 458 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 BST1Q10588 318 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 GPRASP2Q96D09 838 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 NDNQ99608 321 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 UBDO15205 165 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 FASP25445 335 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 APTXQ7Z2E3 356 aaKnown RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 EFL1Q7Z2Z2 1120 aaKnown RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 TISP43B9A030 160 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 CLOCKO15516 846 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 PIAS1O75925 651 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 OCM2P0CE71 109 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 OCMP0CE72 109 aaPredicted RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 DPYSL3Q14195 570 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 CCDC153Q494R4 210 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 ERO1BQ86YB8 467 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 UNC45BQ8IWX7 931 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 GLMNQ92990 594 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 TLCD1Q96CP7 247 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 UBXN6Q9BZV1 441 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 CYLDQ9NQC7 956 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 PRMT7Q9NVM4 692 aaPredicted RBP19.91■□□□□ 0.78
SUDS3-204ENST00000543473 PCDHGB4Q9UN71 923 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
SUDS3-204ENST00000543473 ZSCAN9O15535 394 aaPredicted RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 HOXD10P28358 340 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 RHBDL3P58872 404 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 C15orf52Q6ZUT6 534 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 APOL2Q9BQE5 337 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 AFF4Q9UHB7 1163 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 LIASO43766 372 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 NAMPTP43490 491 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 MRC1P22897 1456 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 A0A087WXM4 84 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 TAL1P17542 331 aaPredicted RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 EIF2B2P49770 351 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 MMP14P50281 582 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 C16orf46Q6P387 395 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 RBBP8Q99708 897 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 THUMPD3Q9BV44 507 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 TRIM54Q9BYV2 358 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 TRDMT1O14717 391 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 PMPCBO75439 489 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 MYO1DO94832 1006 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 C6orf222P0C671 652 aaPredicted RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 PKNOX1P55347 436 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 ZC3H12BQ5HYM0 836 aaKnown RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 IL31Q6EBC2 164 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 C1orf186Q6ZWK4 172 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 FAM71AQ8IYT1 594 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 PPP1R2P1Q96PQ5 205 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 SAE1Q9UBE0 346 aaPredicted RBP19.9■□□□□ 0.78
SUDS3-204ENST00000543473 TEKT2Q9UIF3 430 aa19.9■□□□□ 0.78
SUDS3-204ENST00000543473 ZMYM2Q9UBW7 1377 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 MT-CO1P00395 513 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 MARSP56192 900 aaKnown RBP19.89■□□□□ 0.78
SUDS3-204ENST00000543473 MMRN1Q13201 1228 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 GLRA4Q5JXX5 417 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 SZRD1Q7Z422 152 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 CLNKQ7Z7G1 428 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 CERS5Q8N5B7 392 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 COLGALT1Q8NBJ5 622 aa19.89■□□□□ 0.78
SUDS3-204ENST00000543473 DRG1Q9Y295 367 aaKnown RBP19.89■□□□□ 0.78
SUDS3-204ENST00000543473 APOC4-APOC2K7ER74 178 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 NR5A2O00482 541 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 NOL4O94818 638 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 APOC2P02655 101 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 FCGR1AP12314 374 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 TRAF7Q6Q0C0 670 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 CROCCP3Q8IVE0 287 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 TAGAPQ8N103 731 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 ZSCAN18Q8TBC5 510 aaPredicted RBP19.89■□□□□ 0.77
SUDS3-204ENST00000543473 GIMAP4Q9NUV9 329 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 DAPK2Q9UIK4 370 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 AP4E1Q9UPM8 1137 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 GSC2O15499 205 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 EPHX2P34913 555 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 PTPN11Q06124 597 aaPredicted RBP19.89■□□□□ 0.77
SUDS3-204ENST00000543473 CWF19L1Q69YN2 538 aaKnown RBP19.89■□□□□ 0.77
SUDS3-204ENST00000543473 ULK2Q8IYT8 1036 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 KIAA1257Q9ULG3 409 aa19.89■□□□□ 0.77
SUDS3-204ENST00000543473 MAGEB2O15479 319 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 ANXA9O76027 345 aa19.88■□□□□ 0.77
SUDS3-204ENST00000543473 PAEPP09466 180 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms