RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SCAPQ12770 1279 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 GPR17Q13304 367 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 NOMO1Q15155 1222 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 FAM131BQ86XD5 332 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CMTR2Q8IYT2 770 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 PQLC3Q8N755 202 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 BBOF1Q8ND07 529 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 SLC7A14Q8TBB6 771 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 SPPL2BQ8TCT7 592 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 LRRC45Q96CN5 670 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 DHX35Q9H5Z1 703 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 PIGVQ9NUD9 493 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ASIC3Q9UHC3 531 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ZNF148Q9UQR1 794 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 MCF2LO15068 1137 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 KRT14P02533 472 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PECAM1P16284 738 aaPredicted RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 ZFXP17010 805 aaPredicted RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 ITIH2P19823 946 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 IVDP26440 423 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PBX3P40426 434 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CAV1Q03135 178 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CALCOCO2Q13137 446 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 GPS2Q13227 327 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 BIRC2Q13490 618 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 SPDYCQ5MJ68 293 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 BSPRYQ5W0U4 402 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ALS2CLQ60I27 953 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 GSTA5Q7RTV2 222 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CCDC91Q7Z6B0 441 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 TSEN2Q8NCE0 465 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 PCDH19Q8TAB3 1148 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 IGSF21Q96ID5 467 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 B3GALT6Q96L58 329 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 TXLNGYQ9BZA5 131 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 FAM204AQ9H8W3 233 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 WDR6Q9NNW5 1121 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 MTRF1LQ9UGC7 380 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 SCML2Q9UQR0 700 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 BACE2Q9Y5Z0 518 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 KIAA1671Q9BY89 1806 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 MTMR11A4FU01 709 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 NDC80O14777 642 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 IGLV3-25P01717 112 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CPB1P15086 417 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PLTPP55058 493 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
GNE-206ENST00000543356 DEFB103AP81534 67 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 KCTD19Q17RG1 926 aaPredicted RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 USP41Q3LFD5 358 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 EFHC2Q5JST6 749 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 TMC3Q7Z5M5 1100 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 SCN4BQ8IWT1 228 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 NUP93Q8N1F7 819 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PLD5Q8N7P1 536 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 SCAMP5Q8TAC9 235 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 FBXO25Q8TCJ0 367 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CSPG4P5Q96PW8 444 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 FBXO44Q9H4M3 255 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 PCDH9Q9HC56 1237 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 COMMD8Q9NX08 183 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 IL37Q9NZH6 218 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 POLR3GO15318 223 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 PPFIA2O75334 1257 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 CXCR3P49682 368 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 EIF3EP60228 445 aaKnown RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 NME3Q13232 169 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 PPP6R3Q5H9R7 873 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 SLC8B1Q6J4K2 584 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 RHBDF2Q6PJF5 856 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 RSPO2Q6UXX9 243 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 TAS1R1Q7RTX1 841 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 UBE2Q1Q7Z7E8 422 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 SLC39A11Q8N1S5 342 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 ARHGAP18Q8N392 663 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 DQX1Q8TE96 717 aaKnown RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 PIK3R5Q8WYR1 880 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 P3H4Q92791 437 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 SPATA17Q96L03 361 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 ZNF558Q96NG5 402 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 HERC2P3Q9BVR0 1158 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 VN1R3Q9BXE9 311 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 IL23AQ9NPF7 189 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 DDIT4Q9NX09 232 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 FBXW11Q9UKB1 542 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 FAM92AA1XBS5 289 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 GOLGA6BA6NDN3 693 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 H3BRJ5 948 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 TP73O15350 636 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 VNN2O95498 520 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 HAPLN1P10915 354 aaPredicted RBP9.68□□□□□ -0.86
GNE-206ENST00000543356 LAG3P18627 525 aa9.68□□□□□ -0.86
GNE-206ENST00000543356 ADRA1BP35368 520 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms