RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 DPH1Q9BZG8 443 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CCSER1Q9C0I3 900 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 ZSCAN16Q9H4T2 348 aaPredicted RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 CCSER2Q9H7U1 834 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 ASCL3Q9NQ33 180 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CHORDC1Q9UHD1 332 aaPredicted RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 CPSF3Q9UKF6 684 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 CREBBPQ92793 2442 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 PMS2P1A4D2B8 440 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 FAM47DPA6NHR8 397 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 TISP43B9A030 160 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 F8VP50 259 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 WNT9AO14904 365 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 EFSO43281 561 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 CACNG3O60359 315 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 SYNCRIPO60506 623 aaKnown RBP10.33□□□□□ -0.76
CHFR-220ENST00000541817 TSPAN3O60637 253 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 SEMA4FO95754 770 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 IGLV3-19P01714 112 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
CHFR-220ENST00000541817 PDGFRBP09619 1106 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 PRKCHP24723 683 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 LMO2P25791 158 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 CD27P26842 260 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 ANXA13P27216 316 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 CACNA2D1P54289 1103 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 GEN1Q17RS7 908 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 C1orf186Q6ZWK4 172 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 DDX42Q86XP3 938 aaKnown RBP eCLIP10.33□□□□□ -0.76
CHFR-220ENST00000541817 ADGRF2Q8IZF7 708 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 ZNF366Q8N895 744 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 KIAA1958Q8N8K9 716 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 RNF214Q8ND24 703 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 RFFLQ8WZ73 363 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 OTUB2Q96DC9 234 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 SPATA17Q96L03 361 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
CHFR-220ENST00000541817 TTLL2Q9BWV7 592 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 ACE2Q9BYF1 805 aaPredicted RBP10.33□□□□□ -0.76
CHFR-220ENST00000541817 OSBPL2Q9H1P3 480 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 LRRC4CQ9HCJ2 640 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 CRTAC1Q9NQ79 661 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 TMEM30AQ9NV96 361 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 AGAP1Q9UPQ3 857 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 SSUH2Q9Y2M2 353 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.33□□□□□ -0.76
CHFR-220ENST00000541817 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 PTPRJQ12913 1337 aa10.33□□□□□ -0.76
CHFR-220ENST00000541817 DOPEY1Q5JWR5 2465 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 PP2D1A8MPX8 630 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 ANKRD63C9JTQ0 380 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 HUS1O60921 280 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 SDC3O75056 442 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 PLS3P13797 630 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 PLCG1P19174 1290 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 POLR2BP30876 1174 aaKnown RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 MAGEA11P43364 429 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 WNT7BP56706 349 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 SKIDA1Q1XH10 827 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 C3orf38Q5JPI3 329 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 TDRD10Q5VZ19 366 aaKnown RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 FAM171BQ6P995 826 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 CD302Q8IX05 232 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 FUBP3Q96I24 572 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHFR-220ENST00000541817 SPATA32Q96LK8 384 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 NAP1L5Q96NT1 182 aaPredicted RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 SYT15Q9BQS2 421 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 LHX5Q9H2C1 402 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 IKZF4Q9H2S9 585 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 CAAP1Q9H8G2 361 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 POLR1BQ9H9Y6 1135 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 EBF2Q9HAK2 575 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 OSGEPQ9NPF4 335 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 THAP10Q9P2Z0 257 aaPredicted RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 ORC3Q9UBD5 711 aaPredicted RBP10.32□□□□□ -0.76
CHFR-220ENST00000541817 CFAP45Q9UL16 551 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 SATB2Q9UPW6 733 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 DERAQ9Y315 318 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 SNX9Q9Y5X1 595 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
CHFR-220ENST00000541817 A0A0B4J269 797 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 A0A1W2PNU3 283 aaPredicted RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 CLEC18AA5D8T8 446 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 VILLO15195 856 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 DFNA5O60443 496 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CSO75390 466 aaKnown RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 ITGB3P05106 788 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 IGHV4-34P06331 123 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 EPHX1P07099 455 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 OR52Z1P0C646 297 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 EPHA8P29322 1005 aaPredicted RBP10.31□□□□□ -0.76
CHFR-220ENST00000541817 CDC25AP30304 524 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 LSSP48449 732 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 SMTNP53814 917 aa10.31□□□□□ -0.76
CHFR-220ENST00000541817 CDH8P55286 799 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms