RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ICAM3P32942 547 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 MAP3K7CLP57077 242 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 MOGSQ13724 837 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 FAM47CQ5HY64 1035 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 EFHC2Q5JST6 749 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 CAND1Q86VP6 1230 aaKnown RBP15.56■□□□□ 0.08
VARS2-211ENST00000541562 SLC10A4Q96EP9 437 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 MARK4Q96L34 752 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 KCNK16Q96T55 309 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 OSBPL1AQ9BXW6 950 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 CCDC134Q9H6E4 229 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 RSAD1Q9HA92 442 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 FER1L6Q2WGJ9 1857 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 USP34Q70CQ2 3546 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 CAPN9O14815 690 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 SOX11P35716 441 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 RBP5P82980 135 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 HEATR6Q6AI08 1181 aaKnown RBP15.56■□□□□ 0.08
VARS2-211ENST00000541562 DEFB106AQ8N104 65 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 FAM167AQ96KS9 214 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 CADM1Q9BY67 442 aaKnown RBP15.56■□□□□ 0.08
VARS2-211ENST00000541562 C2orf40Q9H1Z8 148 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 PTPRHQ9HD43 1115 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 SUFUQ9UMX1 484 aa15.56■□□□□ 0.08
VARS2-211ENST00000541562 DRG1Q9Y295 367 aaKnown RBP15.56■□□□□ 0.08
VARS2-211ENST00000541562 TTC3P53804 2025 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 IQANK1A0A1B0GTG1 560 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 TSPAN1O60635 241 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 GJA5P36382 358 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 SULT1E1P49888 294 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 GRIK4Q16099 956 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 SYPL2Q5VXT5 272 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 BANPQ8N9N5 519 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 TMEM40Q8WWA1 233 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 SMG5Q9UPR3 1016 aaKnown RBP15.55■□□□□ 0.08
VARS2-211ENST00000541562 CFAP73A6NFT4 308 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 B4GALT4O60513 344 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 AMHP03971 560 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 SLC25A3Q00325 362 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 TREML1Q86YW5 311 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 DCLK2Q8N568 766 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 RNF34Q969K3 372 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 C12orf42Q96LP6 360 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 USP29Q9HBJ7 922 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 CPA4Q9UI42 421 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 SSC5DA1L4H1 1573 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
VARS2-211ENST00000541562 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
VARS2-211ENST00000541562 MT-CO1P00395 513 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 VDRP11473 427 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 PSMB4P28070 264 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 USP4Q13107 963 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 ZNF268Q14587 947 aaPredicted RBP15.55■□□□□ 0.08
VARS2-211ENST00000541562 RASA2Q15283 850 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 KLHL38Q2WGJ6 581 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 MAP7D3Q8IWC1 876 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 OR6J1Q8NGC5 347 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 PRMT7Q9NVM4 692 aaPredicted RBP15.55■□□□□ 0.08
VARS2-211ENST00000541562 CNTN6Q9UQ52 1028 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 TNFSF13BQ9Y275 285 aa15.55■□□□□ 0.08
VARS2-211ENST00000541562 C5orf42Q9H799 3197 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 M0QYT0 321 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 GNL1P36915 607 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 TWF2Q6IBS0 349 aaKnown RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 ADGRD1Q6QNK2 874 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 CYP4V2Q6ZWL3 525 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 UCMAQ8WVF2 138 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 KLC2Q9H0B6 622 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 SRRM3A6NNA2 597 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 FAM72CH0Y354 149 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 STK10O94804 968 aaKnown RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 UBTFL6P0CB48 400 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 TKTP29401 623 aaKnown RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 ARHGAP1Q07960 439 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 NOMO1Q15155 1222 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 FAM72AQ5TYM5 149 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 FAM72DQ6L9T8 149 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 CCDC62Q6P9F0 684 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 FAM72BQ86X60 149 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 CMASQ8NFW8 434 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 SLC7A14Q8TBB6 771 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 CCHCR1Q8TD31 782 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 SNX25Q9H3E2 840 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 MYCP01106 439 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 GSTA1P08263 222 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 ZCCHC18P0CG32 403 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 P4HA1P13674 534 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 PTDSS1P48651 473 aaKnown RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 RASSF2P50749 326 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 SOX4Q06945 474 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 COLGALT1Q8NBJ5 622 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 KCTD15Q96SI1 283 aaPredicted RBP15.54■□□□□ 0.08
VARS2-211ENST00000541562 AGAP2Q99490 1192 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 NRDE2Q9H7Z3 1164 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 PNPOQ9NVS9 261 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 PCDHGC3Q9UN70 934 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 STARD13Q9Y3M8 1113 aa15.54■□□□□ 0.08
VARS2-211ENST00000541562 PRR5-ARHGAP8B1AHC4 643 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 MFSD11O43934 449 aa15.53■□□□□ 0.08
VARS2-211ENST00000541562 DCTN3O75935 186 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms