RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MPP1Q00013 466 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TRAF2Q12933 501 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RIN1Q13671 783 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 E2F2Q14209 437 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 MLANAQ16655 118 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 MGAT5BQ3V5L5 792 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PLA1AQ53H76 456 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ATPAF1Q5TC12 328 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 MANEALQ5VSG8 457 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ICE2Q659A1 982 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PRIMA1Q86XR5 153 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TMC8Q8IU68 726 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PCYOX1LQ8NBM8 494 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC150Q8NCX0 1101 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PAPD5Q8NDF8 572 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 POMGNT1Q8WZA1 660 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PERPQ96FX8 193 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PHACTR3Q96KR7 559 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 NEUROD6Q96NK8 337 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TEFMQ96QE5 360 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KATNAL1Q9BW62 490 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 NCDNQ9UBB6 729 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CRYL1Q9Y2S2 319 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TMX2Q9Y320 296 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KCTD3Q9Y597 815 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KCNJ18B7U540 433 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KIF28PB7ZC32 967 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DNPH1O43598 174 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SNX2O60749 519 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SUN1O94901 812 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TBX18O95935 607 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LYL1P12980 280 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ATICP31939 592 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ICAM3P32942 547 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 BLKP51451 505 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SLURP1P55000 103 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SCAPQ12770 1279 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FOXL1Q12952 345 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PCGF3Q3KNV8 242 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CD300EQ496F6 205 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 AKNAD1Q5T1N1 836 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF618Q5T7W0 954 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM102AQ5T9C2 384 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 NFRKBQ6P4R8 1299 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 Q6ZRM9 215 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 Q6ZSN1 163 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PIK3AP1Q6ZUJ8 805 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PTF1AQ7RTS3 328 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ANKRD23Q86SG2 305 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GATAD2AQ86YP4 633 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MB21D1Q8N884 522 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM46DQ8NEK8 389 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 OR52L2PQ8NGH6 319 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 HDAC2Q92769 488 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KAT2AQ92830 837 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM162AQ96A26 154 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF845Q96IR2 970 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RSRC1Q96IZ7 334 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 UHRF1Q96T88 793 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SMOQ99835 787 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SENP6Q9GZR1 1112 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GALNT9Q9HCQ5 603 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 UBN1Q9NPG3 1134 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KIF17Q9P2E2 1029 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SNX14Q9Y5W7 946 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 MAST3O60307 1309 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC195A0A1B0GUA6 201 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LOC102723971A0A1B0GUV8 181 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 C16orf96A6NNT2 1141 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SLCO1B7G3V0H7 640 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 POLRMTO00411 1230 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PLSCR1O15162 318 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GPR42O15529 346 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 TSPAN9O75954 239 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ANXA6P08133 673 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 GATA3P23771 443 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PCSK6P29122 969 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FOLR3P41439 243 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 NPEPPSP55786 919 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RBM6P78332 1123 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SETQ01105 290 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 OCA2Q04671 838 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DDX10Q13206 875 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 DNASE1L3Q13609 305 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 CAMK1Q14012 370 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 AARS2Q5JTZ9 985 aaKnown RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 EFHC1Q5JVL4 640 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 KRT79Q5XKE5 535 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 B3GNTL1Q67FW5 361 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 PLAG1Q6DJT9 500 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 ABLIM2Q6H8Q1 611 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LIMS2Q7Z4I7 341 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 SLC44A2Q8IWA5 706 aaPredicted RBP1.19□□□□□ -2.22
HIF1A-204ENST00000539097 RTKN2Q8IZC4 609 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 NCSTNQ92542 709 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 FAM149B1Q96BN6 582 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LRRC37BQ96QE4 947 aa1.19□□□□□ -2.22
HIF1A-204ENST00000539097 LMF1Q96S06 567 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms