RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 OLA1Q9NTK5 396 aaKnown RBP12.01□□□□□ -0.49
CDCA3-206ENST00000536241 PIGVQ9NUD9 493 aa12.01□□□□□ -0.49
CDCA3-206ENST00000536241 DDIT4Q9NX09 232 aa12.01□□□□□ -0.49
CDCA3-206ENST00000536241 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
CDCA3-206ENST00000536241 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
CDCA3-206ENST00000536241 JRKLQ9Y4A0 524 aa12.01□□□□□ -0.49
CDCA3-206ENST00000536241 NOTCH4Q99466 2003 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 FANCGO15287 622 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 MSI1O43347 362 aaKnown RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 PAPLNO95428 1278 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 F9P00740 461 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 POU2F2P09086 479 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 HDCP19113 662 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 IL1R2P27930 398 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 CASQ1P31415 396 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 PCK1P35558 622 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 LTBRP36941 435 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 DNA2P51530 1060 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 EIF4EBP2Q13542 120 aaPredicted RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 SLC5A9Q2M3M2 681 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 PRSS36Q5K4E3 855 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 STXBP5Q5T5C0 1151 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 TXNRD3NBQ6F5E7 133 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 MSANTD2Q6P1R3 559 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 GPR149Q86SP6 731 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 FAM131BQ86XD5 332 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 MIB1Q86YT6 1006 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 ARL14EPQ8N8R7 260 aaPredicted RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 LEMD2Q8NC56 503 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 ZNF592Q92610 1267 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 CD101Q93033 1021 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 PGAP3Q96FM1 320 aaPredicted RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 GCNAQ96QF7 691 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 SLC22A12Q96S37 553 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 CDK5RAP1Q96SZ6 601 aaKnown RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 TLR10Q9BXR5 811 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 SLC46A2Q9BY10 475 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 NACA2Q9H009 215 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 S1PR5Q9H228 398 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 SMOC2Q9H3U7 446 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 WDCPQ9H6R7 721 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 FAM204AQ9H8W3 233 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 ZWILCHQ9H900 591 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 WDR6Q9NNW5 1121 aaKnown RBP12□□□□□ -0.49
CDCA3-206ENST00000536241 MARCH2Q9P0N8 246 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 RASAL2Q9UJF2 1139 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 DNMT3LQ9UJW3 386 aa12□□□□□ -0.49
CDCA3-206ENST00000536241 ANAPC1Q9H1A4 1944 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 SLC12A8A0AV02 714 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 ZNF197O14709 1029 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 IRAK2O43187 625 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 PRPSAP2O60256 369 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 FGF19O95750 216 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 IGLV3-25P01717 112 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 HMBSP08397 361 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 RDXP35241 583 aaKnown RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 GJC1P36383 396 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 TUBP50607 506 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 CBX2Q14781 532 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 RPS6KA1Q15418 735 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 TEAD2Q15562 447 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 HADHQ16836 314 aaKnown RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 ZC3H12AQ5D1E8 599 aaKnown RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 KCNT1Q5JUK3 1230 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 GPR158Q5T848 1215 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 KLHDC10Q6PID8 442 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 POTEHQ6S545 545 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 SND1Q7KZF4 910 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 TADA2BQ86TJ2 420 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 RHOT1Q8IXI2 618 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 DEFB123Q8N688 67 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 ITFG1Q8TB96 612 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 KRT35Q92764 455 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 RNF34Q969K3 372 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 HES6Q96HZ4 224 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 SERPINB11Q96P15 392 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 PEBP4Q96S96 227 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 ADAM7Q9H2U9 754 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 TMPRSS4Q9NRS4 437 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 GKN1Q9NS71 199 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 MRPS23Q9Y3D9 190 aaKnown RBP11.99□□□□□ -0.49
CDCA3-206ENST00000536241 PCDHA3Q9Y5H8 950 aa11.99□□□□□ -0.49
CDCA3-206ENST00000536241 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 DDX3YO15523 660 aaKnown RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 TBX10O75333 385 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 TUBB4AP04350 444 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 RARAP10276 462 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 MBL2P11226 248 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-206ENST00000536241 CTNNA2P26232 953 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 ADRA1BP35368 520 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 MARCKSL1P49006 195 aa11.98□□□□□ -0.49
CDCA3-206ENST00000536241 CXCR3P49682 368 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms