RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 KITP10721 976 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 RBP3P10745 1247 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 COX4I1P13073 169 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PROZP22891 400 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 YY1P25490 414 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 YWHABP31946 246 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SSTR3P32745 418 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ABCD1P33897 745 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 HSPA13P48723 471 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ACADVLP49748 655 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 KCNQ4P56696 695 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 EIF3EP60228 445 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 YWHAGP61981 247 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 UBXN2AP68543 259 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 GSTM4Q03013 218 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PCLAFQ15004 111 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ZNF423Q2M1K9 1284 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 GRAMD1BQ3KR37 738 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 FASTKD1Q53R41 847 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 WDR44Q5JSH3 913 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 LGSNQ5TDP6 509 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 FAXCQ5TGI0 409 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 STEAP4Q687X5 459 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PDPK2PQ6A1A2 396 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ZFP1Q6P2D0 407 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 DNAJC24Q6P3W2 148 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 FRMD7Q6ZUT3 714 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 CYP4V2Q6ZWL3 525 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 USP37Q86T82 979 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 WDR75Q8IWA0 830 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 MAP7D3Q8IWC1 876 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 DEFB107AQ8IZN7 70 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 EFCAB3Q8N7B9 438 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 IL31RAQ8NI17 732 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 JOSD2Q8TAC2 188 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PIWIL2Q8TC59 973 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 RSAD2Q8WXG1 361 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 RPGRQ92834 1020 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 LRRC39Q96DD0 335 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SIGLEC10Q96LC7 697 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ZDHHC15Q96MV8 337 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 RILPQ96NA2 401 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 MCEEQ96PE7 176 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 CGRRF1Q99675 332 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 CCT7Q99832 543 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 OXCT2Q9BYC2 517 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 ZNF518BQ9C0D4 1074 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 HAPLN2Q9GZV7 340 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PRDM16Q9HAZ2 1276 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 DDX18Q9NVP1 670 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PNPOQ9NVS9 261 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 BTBD7Q9P203 1132 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 COL20A1Q9P218 1284 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 THEGQ9P2T0 379 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SAE1Q9UBE0 346 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PI4KBQ9UBF8 816 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 MARCOQ9UEW3 520 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 CDH7Q9ULB5 785 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 MRPL11Q9Y3B7 192 aaKnown RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 NUB1Q9Y5A7 615 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-215ENST00000536145 CNTNAP2Q9UHC6 1331 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 SMCHD1A6NHR9 2005 aa7.16□□□□□ -1.26
CPSF7-215ENST00000536145 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SLC15A5A6NIM6 579 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 FAM155AB1AL88 458 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 H3BNH8 94 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 DDX39AO00148 427 aaKnown RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 ACOT8O14734 319 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 ADCY3O60266 1144 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 LRCH4O75427 683 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 BMP10O95393 424 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 KRT7P08729 469 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 INHBBP09529 407 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SRGAP2BP0DMP2 458 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 THRAP10827 490 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 CCDC130P13994 396 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 YBX3P16989 372 aaKnown RBP eCLIP7.15□□□□□ -1.263e-7■■□□□ 12.8
CPSF7-215ENST00000536145 ZNF26P17031 533 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 EIF4BP23588 611 aaKnown RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 TBXAS1P24557 533 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 HOXD11P31277 338 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 MAGEA12P43365 314 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 CRKP46108 304 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SLC1A6P48664 564 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 NRLP54845 237 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 HDAC4P56524 1084 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 RPL10AP62906 217 aaKnown RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 TUBA4AP68366 448 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 NIPAL4Q0D2K0 466 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 SLC10A2Q12908 348 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-215ENST00000536145 BMPR2Q13873 1038 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 HERC3Q15034 1050 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 ABCB5Q2M3G0 1257 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 TKFCQ3LXA3 575 aa7.15□□□□□ -1.26
CPSF7-215ENST00000536145 PIGGQ5H8A4 983 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms