RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SLC3A2P08195 630 aaKnown RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 SRGAP2BP0DMP2 458 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 ATF7P17544 494 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 ATP5F1P24539 256 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 MST1P26927 711 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 GSTM5P46439 218 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 PLCD1P51178 756 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 TBX4P57082 545 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 SEMA3BQ13214 749 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 FHL3Q13643 280 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 KLF9Q13886 244 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 KCNJ12Q14500 433 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 ETFDHQ16134 617 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 SLC5A9Q2M3M2 681 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 TMTC4Q5T4D3 741 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 MEX3CQ5U5Q3 659 aaKnown RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 RAP1GAP2Q684P5 730 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 TLDC1Q6P9B6 456 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 OR2C3Q8N628 320 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 ZNF398Q8TD17 642 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 MAP4K1Q92918 833 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 MYD88Q99836 296 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 CERS4Q9HA82 394 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 SAP30LQ9HAJ7 183 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 VPS45Q9NRW7 570 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 TUBA8Q9NY65 449 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-205ENST00000535375 RGL1Q9NZL6 768 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 PHTF1Q9UMS5 762 aa5.95□□□□□ -1.46
PRKDC-205ENST00000535375 FAM234BA2RU67 622 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 TTC34A8MYJ7 566 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 FCHO1O14526 889 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 BCAR3O75815 825 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 HMGB1P09429 215 aaKnown RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 EGR1P18146 543 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 MMP8P22894 467 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 EEF1GP26641 437 aaKnown RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 GABRB3P28472 473 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 TACR3P29371 465 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 NEK3P51956 506 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 WDR5P61964 334 aaKnown RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 NSUN2Q08J23 767 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 ATP1A4Q13733 1029 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 CNGA3Q16281 694 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 MAPKAPK3Q16644 382 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 FAM110CQ1W6H9 321 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 ARHGAP15Q53QZ3 475 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 TMEM196Q5HYL7 178 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 IZUMO3Q5VZ72 239 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 CCSAPQ6IQ19 270 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 ZNF425Q6IV72 752 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 PMM1Q92871 262 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 PRR11Q96HE9 360 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 WDR24Q96S15 920 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 NUAK2Q9H093 628 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 VPS16Q9H269 839 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 PCDHB2Q9Y5E7 798 aa5.94□□□□□ -1.46
PRKDC-205ENST00000535375 HEMK1Q9Y5R4 338 aaPredicted RBP5.94□□□□□ -1.46
PRKDC-205ENST00000535375 PODXLO00592 558 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 HNRNPDLO14979 420 aaKnown RBP5.93□□□□□ -1.46
PRKDC-205ENST00000535375 PLIN1O60240 522 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 PECAM1P16284 738 aaPredicted RBP5.93□□□□□ -1.46
PRKDC-205ENST00000535375 TM4SF4P48230 202 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 RAE1P78406 368 aaKnown RBP5.93□□□□□ -1.46
PRKDC-205ENST00000535375 KPNB1Q14974 876 aaKnown RBP5.93□□□□□ -1.46
PRKDC-205ENST00000535375 SLC35G1Q2M3R5 365 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 C1QL2Q7Z5L3 287 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 GLIS1Q8NBF1 620 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 OVCA2Q8WZ82 227 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 SPATA31A1Q5TZJ5 1347 aa5.93□□□□□ -1.46
PRKDC-205ENST00000535375 E5RJQ4 531 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 USP12O75317 370 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 CD63P08962 238 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
PRKDC-205ENST00000535375 DUSP1P28562 367 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 PTGER1P34995 402 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 IGHMBP2P38935 993 aaKnown RBP5.92□□□□□ -1.46
PRKDC-205ENST00000535375 ZNF91Q05481 1191 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 SEC23BQ15437 767 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 C11orf87Q6NUJ2 197 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 SRLQ86TD4 932 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 RASGRP3Q8IV61 690 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 KAZALD1Q96I82 304 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 ABHD10Q9NUJ1 306 aa5.92□□□□□ -1.46
PRKDC-205ENST00000535375 TRNAU1APQ9NX07 287 aaKnown RBP5.92□□□□□ -1.46
PRKDC-205ENST00000535375 PPEF2O14830 753 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 TP73O15350 636 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 CBFA2T3O75081 653 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 MATN1P21941 496 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 VPS41P49754 854 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 HSF1Q00613 529 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 RABEP1Q15276 862 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 Q4G0T1 1027 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 CCDC144NLQ6NUI1 221 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 KRT27Q7Z3Y8 459 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 SKAP1Q86WV1 359 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 SCARB1Q8WTV0 552 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 GDF15Q99988 308 aa5.91□□□□□ -1.46
PRKDC-205ENST00000535375 NUDT22Q9BRQ3 303 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms