RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 SLC35G1Q2M3R5 365 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 AASDHQ4L235 1098 aaPredicted RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 CEP78Q5JTW2 689 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 MEX3CQ5U5Q3 659 aaKnown RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 GRHL2Q6ISB3 625 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 ANO7Q6IWH7 933 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SLC18B1Q6NT16 456 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 ZNF66Q6ZN08 573 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 NOL8Q76FK4 1167 aaKnown RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 RASGRP3Q8IV61 690 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 CCDC146Q8IYE0 955 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SYTL1Q8IYJ3 562 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 CLASRPQ8N2M8 674 aaKnown RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 DDB2Q92466 427 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 KAZALD1Q96I82 304 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SGCZQ96LD1 299 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 EIF3CQ99613 913 aaKnown RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 VPS45Q9NRW7 570 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 SEMA5BQ9P283 1151 aa3.18□□□□□ -1.9
ATM-220ENST00000533526 FNDC1Q4ZHG4 1894 aaPredicted RBP3.18□□□□□ -1.9
ATM-220ENST00000533526 ARHGEF17Q96PE2 2063 aaPredicted RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 PODXLO00592 558 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 CA12O43570 354 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 CBFA2T3O75081 653 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 NTSR2O95665 410 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 YY1P25490 414 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 TACR3P29371 465 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 IGHMBP2P38935 993 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 TECP42680 631 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 HSPA7P48741 367 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 HSF1Q00613 529 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 CSHL1Q14406 222 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 DAZAP2Q15038 168 aaPredicted RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 TRIP6Q15654 476 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 RAB30Q15771 203 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 MPEG1Q2M385 716 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 MTX3Q5HYI7 312 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 CC2D1BQ5T0F9 858 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 TMTC4Q5T4D3 741 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 MORN5Q5VZ52 161 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 FAM90A2PQ658T7 463 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 YTHDF3Q7Z739 585 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 OSR1Q8TAX0 266 aaPredicted RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 PNISRQ8TF01 805 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 TMEM41AQ96HV5 264 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 QTRT1Q9BXR0 403 aaKnown RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 RNF26Q9BY78 433 aaPredicted RBP3.17□□□□□ -1.9
ATM-220ENST00000533526 STK33Q9BYT3 514 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 SLC29A3Q9BZD2 475 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 PRSS22Q9GZN4 317 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 NUAK2Q9H093 628 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 AS3MTQ9HBK9 375 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 TMEM8AQ9HCN3 771 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 DTNAQ9Y4J8 743 aa3.17□□□□□ -1.9
ATM-220ENST00000533526 PCSK5Q92824 1860 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 PNMA6EA0A0J9YXQ4 647 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 SMIM35A0A1B0GVV1 85 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 GOLGA6L3A6NEY3 463 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 DNAJC9-AS1A6NH13 148 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 PRAMEF2O60811 474 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 SLC3A2P08195 630 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 CD63P08962 238 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 PECAM1P16284 738 aaPredicted RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 ABCB4P21439 1286 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 DRD1P21728 446 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 GALNSP34059 522 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 HTR3AP46098 478 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 WDR5P61964 334 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 GHRHRQ02643 423 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 BFSP2Q13515 415 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 CBFBQ13951 182 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 ZNF268Q14587 947 aaPredicted RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 CNGA3Q16281 694 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 TRIM71Q2Q1W2 868 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 GLE1Q53GS7 698 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 TMEM196Q5HYL7 178 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 CCDC144NLQ6NUI1 221 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 PGBD2Q6P3X8 592 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 TOGARAM2Q6ZUX3 1019 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 UBE2Q1Q7Z7E8 422 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 OR52L2PQ8NGH6 319 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 PRSS3P2Q8NHM4 247 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 BCAS4Q8TDM0 211 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 WDR60Q8WVS4 1066 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 GLMPQ8WWB7 406 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 CUL5Q93034 780 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 RPL36ALQ969Q0 106 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 KIAA1191Q96A73 305 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 P2RY11Q96G91 374 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 TMEM79Q9BSE2 394 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 EFHD1Q9BUP0 239 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 SAP30LQ9HAJ7 183 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 FNIP2Q9P278 1114 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 SLC39A10Q9ULF5 831 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 NFU1Q9UMS0 254 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 SCAF8Q9UPN6 1271 aaKnown RBP3.16□□□□□ -1.9
ATM-220ENST00000533526 BTBD3Q9Y2F9 522 aa3.16□□□□□ -1.9
ATM-220ENST00000533526 LRCH1Q9Y2L9 728 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms