RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SYPL2Q5VXT5 272 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 BSPRYQ5W0U4 402 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 MAATS1Q7Z4T9 603 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 EXD1Q8NHP7 514 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 C1orf54Q8WWF1 131 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 FBXO32Q969P5 355 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 NMUR1Q9HB89 426 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 NAALADL1Q9UQQ1 740 aa19.27■□□□□ 0.67
SMPD1-208ENST00000533123 ATP8B1O43520 1251 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 EPCAMP16422 314 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 IL1R2P27930 398 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 ATP11AP98196 1134 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
SMPD1-208ENST00000533123 CYP1B1Q16678 543 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 CDO1Q16878 200 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 RAB6CQ53S08 254 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 ARCQ7LC44 396 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 SCD5Q86SK9 330 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 ATG4AQ8WYN0 398 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 RAPGEF5Q92565 580 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 RAB6CQ9H0N0 254 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 LMAN2LQ9H0V9 348 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 ZWILCHQ9H900 591 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 ASNSD1Q9NWL6 643 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMPD1-208ENST00000533123 GMIPQ9P107 970 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 R3HDM2Q9Y2K5 976 aaKnown RBP19.26■□□□□ 0.67
SMPD1-208ENST00000533123 MYO16Q9Y6X6 1858 aa19.26■□□□□ 0.67
SMPD1-208ENST00000533123 FAM92AA1XBS5 289 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CAPN9O14815 690 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 FAM153BP0C7A2 387 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 NCAM1P13591 858 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 TFE3P19532 575 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 SDC4P31431 198 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CHRNA3P32297 505 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 MATKP42679 507 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 KCNJ1P48048 391 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 EPHB3P54753 998 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 YWHAGP61981 247 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 VEPH1Q14D04 833 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 FAM153CQ494X1 144 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 LRRC38Q5VT99 294 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CCDC137Q6PK04 289 aaKnown RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 SND1Q7KZF4 910 aaKnown RBP eCLIP19.25■□□□□ 0.673e-6■■□□□ 12.2
SMPD1-208ENST00000533123 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 SLITRK1Q96PX8 696 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 TRIM31Q9BZY9 425 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 ZNF576Q9H609 170 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 FAM153AQ9UHL3 310 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 ATG2AQ2TAZ0 1938 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 A0A1W2PQH9 124 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 BHMG1C9JSJ3 638 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CSH1P0DML2 217 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CSH2P0DML3 217 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 KRT10P13645 584 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 HMGA1P17096 107 aaKnown RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 ECHS1P30084 290 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 PTGIRP43119 386 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 ADCY2Q08462 1091 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 KLF1Q13351 362 aaPredicted RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 TAF12Q16514 161 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 PPP2R5EQ16537 467 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 LRIT3Q3SXY7 679 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 MFSD7Q6UXD7 560 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CCDC149Q6ZUS6 474 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 MON1AQ86VX9 555 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 SLC2A13Q96QE2 648 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 FAM118BQ9BPY3 351 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 CNPY3Q9BT09 278 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 DDX23Q9BUQ8 820 aaKnown RBP19.25■□□□□ 0.67
SMPD1-208ENST00000533123 ADAM33Q9BZ11 813 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 OSBPL8Q9BZF1 889 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 TLE6Q9H808 572 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 OSER1Q9NX31 292 aa19.25■□□□□ 0.67
SMPD1-208ENST00000533123 MTCL1Q9Y4B5 1905 aaKnown RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 DAPK3O43293 454 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 DAB1O75553 588 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 PITX1P78337 314 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 SNX1Q13596 522 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 DNAJB7Q7Z6W7 309 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 JAMLQ86YT9 394 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 DPH5Q9H2P9 285 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 MAN1C1Q9NR34 630 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 PCSK1NQ9UHG2 260 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 HCFC2Q9Y5Z7 792 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 LRG1P02750 347 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 NOS2P35228 1153 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 COILP38432 576 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 NRIP1P48552 1158 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 BTBD8Q5XKL5 378 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 KAZNQ674X7 775 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 RCOR2Q8IZ40 523 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 C12orf50Q8NA57 414 aaPredicted RBP19.24■□□□□ 0.67
SMPD1-208ENST00000533123 SLC22A17Q8WUG5 538 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 PSMG2Q969U7 264 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 TTLL2Q9BWV7 592 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 COMMD8Q9NX08 183 aa19.24■□□□□ 0.67
SMPD1-208ENST00000533123 PCYOX1Q9UHG3 505 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms