RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RBSNQ9H1K0 784 aa17.42■□□□□ 0.38
PKP3-209ENST00000533069 GMEB2Q9UKD1 530 aa17.42■□□□□ 0.38
PKP3-209ENST00000533069 MMP17Q9ULZ9 603 aa17.42■□□□□ 0.38
PKP3-209ENST00000533069 HBS1LQ9Y450 684 aaKnown RBP17.42■□□□□ 0.38
PKP3-209ENST00000533069 KCNJ18B7U540 433 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 NEDD8-MDP1E9PL57 170 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 SART1O43290 800 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 HRO43593 1189 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 CALCAP01258 141 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 KLKB1P03952 638 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 HMBSP08397 361 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 GNA15P30679 374 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 CORO1AP31146 461 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 GPD2P43304 727 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 ACADSBP45954 432 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 RPL34P49207 117 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 MESP2Q0VG99 397 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 KCNJ12Q14500 433 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 NCAPHQ15003 741 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 GJB7Q6PEY0 223 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 PRR23BQ6ZRT6 265 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 TPGS1Q6ZTW0 290 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 TRMT11Q7Z4G4 463 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 GPR161Q8N6U8 529 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 TERB1Q8NA31 727 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 RNF214Q8ND24 703 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 TSTD1Q8NFU3 115 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 NDRG1Q92597 394 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 ANP32BQ92688 251 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 HHIPQ96QV1 700 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 DNAJC17Q9NVM6 304 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 EBF1Q9UH73 591 aa17.41■□□□□ 0.38
PKP3-209ENST00000533069 AGO1Q9UL18 857 aaKnown RBP17.41■□□□□ 0.38
PKP3-209ENST00000533069 TBC1D3BA6NDS4 549 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 AXIN1O15169 862 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 THAP12O43422 761 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 GABBR2O75899 941 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 LTFP02788 710 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 TPM2P07951 284 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 USP8P40818 1118 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 KIR2DL1P43626 348 aaPredicted RBP17.4■□□□□ 0.38
PKP3-209ENST00000533069 HARS2P49590 506 aaKnown RBP17.4■□□□□ 0.38
PKP3-209ENST00000533069 TRIP4Q15650 581 aaPredicted RBP17.4■□□□□ 0.38
PKP3-209ENST00000533069 ARHGAP44Q17R89 818 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 MIIPQ5JXC2 388 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 MSANTD2Q6P1R3 559 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 CEP68Q76N32 757 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 FMNL3Q8IVF7 1028 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 ZNF606Q8WXB4 792 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 EDEM1Q92611 657 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 WDR87Q6ZQQ6 2873 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 ZNF292O60281 2723 aa17.4■□□□□ 0.38
PKP3-209ENST00000533069 FRYLO94915 3013 aa17.39■□□□□ 0.38
PKP3-209ENST00000533069 MYH10P35580 1976 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 RPP40O75818 363 aaKnown RBP17.39■□□□□ 0.37
PKP3-209ENST00000533069 LATS1O95835 1130 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 PENKP01210 267 aaPredicted RBP17.39■□□□□ 0.37
PKP3-209ENST00000533069 CYBBP04839 570 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 TPM3P06753 285 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 CHRM1P11229 460 aaPredicted RBP17.39■□□□□ 0.37
PKP3-209ENST00000533069 PXNP49023 591 aaPredicted RBP17.39■□□□□ 0.37
PKP3-209ENST00000533069 DGKEP52429 567 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 APBA1Q02410 837 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 HSP90AA4PQ58FG1 418 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 TCP11X2Q5H9J9 407 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 EOGTQ5NDL2 527 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 CDKAL1Q5VV42 579 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 DENND1BQ6P3S1 775 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 DENND1CQ8IV53 801 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 SFTPA1Q8IWL2 248 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 FAM217AQ8IXS0 508 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 CPXM2Q8N436 756 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 ALLCQ8N6M5 410 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 SIX2Q9NPC8 291 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 ST7Q9NRC1 585 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 SAMSN1Q9NSI8 373 aaKnown RBP17.39■□□□□ 0.37
PKP3-209ENST00000533069 DNAJC12Q9UKB3 198 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 STARD13Q9Y3M8 1113 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 GVINP1Q7Z2Y8 2422 aa17.39■□□□□ 0.37
PKP3-209ENST00000533069 RIF1Q5UIP0 2472 aaKnown RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 PIK3R2O00459 728 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 KLF8O95600 359 aaPredicted RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 RETP07949 1114 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 ZNF18P17022 549 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 CDK11BP21127 795 aaKnown RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 HOXC13P31276 330 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 TIE1P35590 1138 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 DGKGP49619 791 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 PTK2Q05397 1052 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 SRSF5Q13243 272 aaKnown RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 CRY1Q16526 586 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 BEND5Q7L4P6 421 aa17.38■□□□□ 0.37
PKP3-209ENST00000533069 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.38■□□□□ 0.37
PKP3-209ENST00000533069 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms