RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MAGEB16A2A368 324 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 ABHD2P08910 425 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 ADRA1DP25100 572 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 CCR1P32246 355 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 RAB27AP51159 221 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 LBX2Q6XYB7 198 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 CCDC126Q96EE4 140 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 SMARCD1Q96GM5 515 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 BRD8Q9H0E9 1235 aa15.77■□□□□ 0.11
PCDHA3-202ENST00000532566 RHOBTB1O94844 696 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 POMCP01189 267 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 IRF1P10914 325 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 AKR1A1P14550 325 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 GLRBP48167 497 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 RCN1Q15293 331 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 HSDL1Q3SXM5 330 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF75CPQ92670 426 aaPredicted RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 HSFY1Q96LI6 401 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 RUVBL2Q9Y230 463 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 STX7O15400 261 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 DGKIO75912 1065 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 GJB1P08034 283 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CHKAP35790 457 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 ALDH1A3P47895 512 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 RGS4P49798 205 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CDH17Q12864 832 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 PDCD2Q16342 344 aaPredicted RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CTXN3Q4LDR2 81 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 TTC23LQ6PF05 361 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 FAM183BPQ6ZVS7 135 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CELF6Q96J87 481 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 FICDQ9BVA6 458 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CINPQ9BW66 212 aaPredicted RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 GPR63Q9BZJ6 419 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 RBM22Q9NW64 420 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 VPS9D1Q9Y2B5 631 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 TRDMT1O14717 391 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF862O60290 1169 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 AVPR1AP37288 418 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 KBTBD12Q3ZCT8 623 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 TMEM259Q4ZIN3 620 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 PTRHD1Q6GMV3 140 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 DCUN1D1Q96GG9 259 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 RNF157Q96PX1 679 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 DCLRE1BQ9H816 532 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 OLA1Q9NTK5 396 aaKnown RBP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 CNTNAP2Q9UHC6 1331 aa15.76■□□□□ 0.11
PCDHA3-202ENST00000532566 F5H5T6 163 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SNX3O60493 162 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SRP72O76094 671 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SUPT7LO94864 414 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HOXC6P09630 235 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 MGAT1P26572 445 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 NUDT2P50583 147 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 EFEMP1Q12805 493 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ADAM32Q8TC27 787 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 POPDC2Q9HBU9 364 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 CD274Q9NZQ7 290 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 TRHDEQ9UKU6 1024 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 COG5Q9UP83 839 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HES2Q9Y543 173 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ZNF142P52746 1687 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 WDR27A2RRH5 827 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 CHADO15335 359 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HIST1H2AGP0C0S8 130 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HIST1H2ADP20671 130 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 NOS2P35228 1153 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SLC45A4Q5BKX6 768 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 TREML2Q5T2D2 321 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 N4BP2L1Q5TBK1 243 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 AMIGO3Q86WK7 504 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 IFNEQ86WN2 208 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 EME1Q96AY2 570 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HIST1H2AHQ96KK5 128 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 HIST1H2AJQ99878 128 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 H2AFJQ9BTM1 129 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SNRNP25Q9BV90 132 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 TMCC1O94876 653 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 TRUB2O95900 331 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 PGAM1P18669 254 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 CHRM3P20309 590 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SPIRE1Q08AE8 756 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 STX5Q13190 355 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 LLGL2Q6P1M3 1020 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 YTHDF3Q7Z739 585 aaKnown RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 DMAP1Q9NPF5 467 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ETNK2Q9NVF9 386 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 SKAP2O75563 359 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 LTFP02788 710 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 THRAP10827 490 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 TCN1P20061 433 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 FLT3P36888 993 aa15.75■□□□□ 0.11
PCDHA3-202ENST00000532566 ALDH7A1P49419 539 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms