RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CAVIN4Q5BKX8 364 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 EFHC2Q5JST6 749 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ARID3BQ8IVW6 561 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ZC3H7AQ8IWR0 971 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 DEFB107AQ8IZN7 70 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 RMDN1Q96DB5 314 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 CDK5RAP1Q96SZ6 601 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 HERPUD2Q9BSE4 406 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 NPLQ9BXD5 320 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 MRPL9Q9BYD2 267 aaKnown RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ABI2Q9NYB9 513 aaPredicted RBP8.04□□□□□ -1.12
PTPRK-219ENST00000531050 DSEQ9UL01 958 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 SLC8A2Q9UPR5 921 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 AP4S1Q9Y587 144 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 A0A1B0GUL6 1792 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ANKRD36CQ5JPF3 1778 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 RIC1Q4ADV7 1423 aa8.04□□□□□ -1.12
PTPRK-219ENST00000531050 ARHGEF37A1IGU5 675 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ARHGEF35A5YM69 484 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SNTNA6NMZ2 147 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 B8ZZF3 427 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TAF4O00268 1085 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 GCATO75600 419 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 B3GALNT1O75752 331 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 OR52Z1P0C646 297 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 COL6A1P12109 1028 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PTPN1P18031 435 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 CALML3P27482 149 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 STAT1P42224 750 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 COPAP53621 1224 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 DNASE1L3Q13609 305 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 MESDQ14696 234 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TCEAL1Q15170 157 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 STK11Q15831 433 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 INSCQ1MX18 579 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 FAM182AQ5T1J6 154 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TUBA3EQ6PEY2 450 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 AKAP14Q86UN6 197 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TTC17Q96AE7 1141 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TXNDC15Q96J42 360 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF597Q96LX8 424 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 KCTD10Q9H3F6 313 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 RMND5AQ9H871 391 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ARMT1Q9H993 441 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SLC38A10Q9HBR0 1119 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SEPT3Q9UH03 358 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 CHORDC1Q9UHD1 332 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ITGA11Q9UKX5 1188 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 CNOT11Q9UKZ1 510 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PCDHA6Q9UN73 950 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 DNM3Q9UQ16 869 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ITGB4P16144 1822 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 A0A087WXM4 84 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 A0A0B4J269 797 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 CCDC194A0A1B0GVG4 234 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ACOX3O15254 700 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 CLPXO76031 633 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SEC24DO94855 1032 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ADSSP30520 456 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 HOXA7P31268 230 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SOX5P35711 763 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 OPRL1P41146 370 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TECP42680 631 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SLC26A2P50443 739 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 MRPS22P82650 360 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 GALK2Q01415 458 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 COASYQ13057 564 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 NME3Q13232 169 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PMS2P3Q13401 168 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TUBB3Q13509 450 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 FAM47CQ5HY64 1035 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 BEND7Q8N7W2 519 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 NPLOC4Q8TAT6 608 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 LARP4BQ92615 738 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 FAM111AQ96PZ2 611 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 ZNF347Q96SE7 839 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 EBF4Q9BQW3 602 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 C1orf50Q9BV19 199 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 VPS37BQ9H9H4 285 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PPCSQ9HAB8 311 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 NEK6Q9HC98 313 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 AVENQ9NQS1 362 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 COMMD8Q9NX08 183 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SNTG2Q9NY99 539 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 TXNDC16Q9P2K2 825 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 APOBEC2Q9Y235 224 aaKnown RBP8.03□□□□□ -1.12
PTPRK-219ENST00000531050 SLC27A5Q9Y2P5 690 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PCDHA8Q9Y5H6 950 aa8.03□□□□□ -1.12
PTPRK-219ENST00000531050 PRSS51A0A1B0GVH4 220 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 A8MX80 341 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 TRIM77I1YAP6 450 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 SMIM22K7EJ46 135 aa8.02□□□□□ -1.12
PTPRK-219ENST00000531050 ATP5BP06576 529 aaKnown RBP8.02□□□□□ -1.12
PTPRK-219ENST00000531050 IL32P24001 234 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms