RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CYS1Q717R9 158 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 CCDC110Q8TBZ0 833 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 CFAP36Q96G28 342 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 SERAC1Q96JX3 654 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 MKS1Q9NXB0 559 aa17.83■□□□□ 0.45
BRCA2-204ENST00000530893 ADCY6O43306 1168 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 ZNF189O75820 626 aaPredicted RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 MATKP42679 507 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 SLC8A3P57103 927 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 ADAM17P78536 824 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 SEMA5AQ13591 1074 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 HEATR6Q6AI08 1181 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TRIM55Q9BYV6 548 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 IQCGQ9H095 443 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 SAR1AQ9NR31 198 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 GNEQ9Y223 722 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 PIN4Q9Y237 131 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 DYNC1LI2O43237 492 aaPredicted RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 HUS1O60921 280 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 KRT38O76015 456 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 PDGFRBP09619 1106 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 PYGBP11216 843 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 LCP1P13796 627 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TFE3P19532 575 aaPredicted RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 AKAP5P24588 427 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 ARL4AP40617 200 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 GBE1Q04446 702 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 SNX17Q15036 470 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 SLC25A52Q3SY17 297 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 NLRP9Q7RTR0 991 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 PRPF39Q86UA1 669 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 RPAINQ86UA6 219 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 CEP57Q86XR8 500 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TRIM42Q8IWZ5 723 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 CTAGE3PQ8IX95 158 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TOP6BLQ8N6T0 577 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 NPLOC4Q8TAT6 608 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 GSDMBQ8TAX9 411 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 CLEC4CQ8WTT0 213 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 KCTD15Q96SI1 283 aaPredicted RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 KLF6Q99612 283 aaPredicted RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 EBNA1BP2Q99848 306 aaKnown RBP17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TSSK1BQ9BXA7 367 aa17.82■□□□□ 0.44
BRCA2-204ENST00000530893 TRAFD1O14545 582 aaPredicted RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 COPEO14579 308 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SPTLC1O15269 473 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 MLNP12872 115 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 WARSP23381 471 aaKnown RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 LMO2P25791 158 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 FDFT1P37268 417 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SLC10A2Q12908 348 aaPredicted RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 MFSD10Q14728 455 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SYCP2LQ5T4T6 812 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 KIF2BQ8N4N8 673 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 PPM1NQ8N819 430 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SIGLEC10Q96LC7 697 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 OLFM3Q96PB7 478 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 HNRNPABQ99729 332 aaKnown RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 FERMT1Q9BQL6 677 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 NPHS2Q9NP85 383 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 DTLQ9NZJ0 730 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 GJD2Q9UKL4 321 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 USP3Q9Y6I4 520 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SF3B1O75533 1304 aaKnown RBP eCLIP17.81■□□□□ 0.444e-12■■■■■ 275.7
BRCA2-204ENST00000530893 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 TRIM49D1C9J1S8 452 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 DGKIO75912 1065 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 WFS1O76024 890 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 METTL18O95568 372 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 CCND1P24385 295 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SERPINB9P50453 376 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 PRKD1Q15139 912 aaPredicted RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 FAXCQ5TGI0 409 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 NCBP2-AS2Q69YL0 99 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 ZNF534Q76KX8 674 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 ADGRF2Q8IZF7 708 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 TFB1MQ8WVM0 346 aaKnown RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 THOC1Q96FV9 657 aaKnown RBP17.81■□□□□ 0.44
BRCA2-204ENST00000530893 FAM111AQ96PZ2 611 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 SYT17Q9BSW7 474 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 TUBB6Q9BUF5 446 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 PLAC1Q9HBJ0 212 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 FZD10Q9ULW2 581 aa17.81■□□□□ 0.44
BRCA2-204ENST00000530893 WDR91A4D1P6 747 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 FAM159BA6NKW6 160 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 HAS3O00219 553 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 DAB1O75553 588 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 CNTFP26441 200 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 CCNFP41002 786 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 UNC5AQ6ZN44 842 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 NME8Q8N427 588 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 CCDC185Q8N715 623 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 B3GALNT2Q8NCR0 500 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 DNAJB3Q8WWF6 145 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 HTR3CQ8WXA8 447 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 SRPK1Q96SB4 655 aaKnown RBP17.8■□□□□ 0.44
BRCA2-204ENST00000530893 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms