RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ADAMTS13Q76LX8 1427 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 GNG14A0A1W2PPG7 69 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 LACTBL1A8MY62 500 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 H3BRB1 525 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 PDHXO00330 501 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CCNT2O60583 730 aaKnown RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 H2AFXP16104 143 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 AMPD1P23109 780 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 DSG3P32926 999 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ELK3P41970 407 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 HALP42357 657 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 SLC1A6P48664 564 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CXCL9Q07325 125 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 N4BP2L1Q5TBK1 243 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CCDC126Q96EE4 140 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 MED8Q96G25 268 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 FAR2Q96K12 515 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 TUT1Q9H6E5 874 aaKnown RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 DSEQ9UL01 958 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CAB39Q9Y376 341 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 GOLGA8TH3BQL2 631 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 UBOX5O94941 541 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 URODP06132 367 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 POU1F1P28069 291 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ST3GAL1Q11201 340 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM132BQ14DG7 1078 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 TNS2Q63HR2 1409 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CIPCQ9C0C6 399 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■■■□ 26.3
CTNND1-220ENST00000529526 BARX2Q9UMQ3 279 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 USP32Q8NFA0 1604 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 PXDNQ92626 1479 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ALDH1A2O94788 518 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 CKBP12277 381 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ITGALP20701 1170 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 PTENP60484 403 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ANGPT1Q15389 498 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 RINLQ6ZS11 566 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 OTOP1Q7RTM1 612 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-220ENST00000529526 HERC6Q8IVU3 1022 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF606Q8WXB4 792 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 SYT15Q9BQS2 421 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 BATF3Q9NR55 127 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.35□□□□□ -1.073e-9■□□□□ 10.4
CTNND1-220ENST00000529526 ACOT9Q9Y305 439 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 NCOA3Q9Y6Q9 1424 aa8.35□□□□□ -1.07
CTNND1-220ENST00000529526 LINC00854A0A1B0GVQ3 168 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TBKBP1A7MCY6 615 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ANKRD63C9JTQ0 380 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 EML1O00423 815 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ABCB1P08183 1280 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 RPS7P62081 194 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MCL1Q07820 350 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MMRN1Q13201 1228 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 STARD3Q14849 445 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TMEM119Q4V9L6 283 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ILDR2Q71H61 639 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ZFPM1Q8IX07 1006 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 KCTD14Q9BQ13 255 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 UBXN6Q9BZV1 441 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 OSGEPL1Q9H4B0 414 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CXorf56Q9H5V9 222 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 COPS7BQ9H9Q2 264 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DRG1Q9Y295 367 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 MAGEA13PA6NCF6 341 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CALB2P22676 271 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 RARRES1P49788 294 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CCNG1P51959 295 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 EPHB3P54753 998 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF284Q2VY69 593 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 AGKQ53H12 422 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CNPY4Q8N129 248 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ATXN3LQ9H3M9 355 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CYP3A43Q9HB55 503 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 STARD7Q9NQZ5 370 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 L1RE1Q9UN81 338 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 A8MX80 341 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 LTFP02788 710 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SSTR1P30872 391 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 HSPA13P48723 471 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SLC12A3P55017 1021 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CHRNB3Q05901 458 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ALFQ53S48 1182 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 ZNF280DQ6N043 979 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 PHACTR4Q8IZ21 702 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 DNERQ8NFT8 737 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 TLR8Q9NR97 1041 aaKnown RBP8.34□□□□□ -1.07
CTNND1-220ENST00000529526 PADI4Q9UM07 663 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SNX8Q9Y5X2 465 aa8.34□□□□□ -1.07
CTNND1-220ENST00000529526 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms